RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 PODXLO00592 558 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 SERPING1P05155 500 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 PRKCIP41743 596 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 ASPAP45381 313 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 AFF1P51825 1210 aaKnown RBP18.64■□□□□ 0.57
LETMD1-220ENST00000549686 BPIFB4P59827 614 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 WDR5P61964 334 aaKnown RBP18.64■□□□□ 0.57
LETMD1-220ENST00000549686 RNASELQ05823 741 aaKnown RBP18.64■□□□□ 0.57
LETMD1-220ENST00000549686 DSC1Q08554 894 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 GOLGA8FQ08AF8 430 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 GOLGA8DPQ0D2H9 430 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 UPP1Q16831 310 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 DCLRE1AQ6PJP8 1040 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.64■□□□□ 0.575e-8■■■□□ 15.1
LETMD1-220ENST00000549686 LRRC43Q8N309 656 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 TOP1MTQ969P6 601 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 CASD1Q96PB1 797 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 GPR88Q9GZN0 384 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 DNAI2Q9GZS0 605 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.64■□□□□ 0.572e-20■■■■■ 111.8
LETMD1-220ENST00000549686 TBC1D13Q9NVG8 400 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 NXF1Q9UBU9 619 aaKnown RBP18.64■□□□□ 0.57
LETMD1-220ENST00000549686 NR2E3Q9Y5X4 410 aa18.64■□□□□ 0.57
LETMD1-220ENST00000549686 SCN5AQ14524 2016 aa18.63■□□□□ 0.57
LETMD1-220ENST00000549686 KPNA7A9QM74 516 aa18.63■□□□□ 0.57
LETMD1-220ENST00000549686 FOXN3O00409 490 aaPredicted RBP18.63■□□□□ 0.57
LETMD1-220ENST00000549686 ARHGAP6O43182 974 aa18.63■□□□□ 0.57
LETMD1-220ENST00000549686 LILRA4P59901 499 aa18.63■□□□□ 0.57
LETMD1-220ENST00000549686 DPH6Q7L8W6 267 aa18.63■□□□□ 0.57
LETMD1-220ENST00000549686 TNS4Q8IZW8 715 aa18.63■□□□□ 0.57
LETMD1-220ENST00000549686 DPF3Q92784 378 aa18.63■□□□□ 0.57
LETMD1-220ENST00000549686 KAT5Q92993 513 aa18.63■□□□□ 0.57
LETMD1-220ENST00000549686 TMEM175Q9BSA9 504 aa18.63■□□□□ 0.57
LETMD1-220ENST00000549686 MTIF3Q9H2K0 278 aaKnown RBP18.63■□□□□ 0.57
LETMD1-220ENST00000549686 GOLGA2P5Q9HBQ8 144 aa18.63■□□□□ 0.57
LETMD1-220ENST00000549686 CNTN6Q9UQ52 1028 aa18.63■□□□□ 0.57
LETMD1-220ENST00000549686 TTC3P53804 2025 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 TET1Q8NFU7 2136 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 SSU72P8A0A1W2PR75 194 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 CASTOR2A6NHX0 329 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 TMEM189-UBE2V1I3L0A0 370 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 DGKIO75912 1065 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 ACRP10323 421 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 SKILP12757 684 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 ACO1P21399 889 aaKnown RBP18.62■□□□□ 0.57
LETMD1-220ENST00000549686 CLCNKBP51801 687 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 CCZ1BP86790 482 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 CCZ1P86791 482 aaPredicted RBP18.62■□□□□ 0.57
LETMD1-220ENST00000549686 KLHL30Q0D2K2 578 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 WDR59Q6PJI9 974 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 IRF2BP2Q7Z5L9 587 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 VPS36Q86VN1 386 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 COLGALT2Q8IYK4 626 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 CCDC170Q8IYT3 715 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 TOP6BLQ8N6T0 577 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 UBR7Q8N806 425 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 SPATA18Q8TC71 538 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 SNX9Q9Y5X1 595 aa18.62■□□□□ 0.57
LETMD1-220ENST00000549686 PDCD11Q14690 1871 aaKnown RBP18.61■□□□□ 0.57
LETMD1-220ENST00000549686 TBKBP1A7MCY6 615 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 PPEF2O14830 753 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 HUS1O60921 280 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 TACC1O75410 805 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 GFPT2O94808 682 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 KRT5P13647 590 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 AARSP49588 968 aaKnown RBP eCLIP18.61■□□□□ 0.57
LETMD1-220ENST00000549686 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
LETMD1-220ENST00000549686 SCARA3Q6AZY7 606 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 ZNF365Q70YC5 407 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 C16orf59Q7L2K0 433 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 TMEM139Q8IV31 216 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 HERVK_113Q902F9 699 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 MMS19Q96T76 1030 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 ARID3AQ99856 593 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 KCNF1Q9H3M0 494 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 CISHQ9NSE2 258 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 POLIQ9UNA4 740 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 PCDHB4Q9Y5E5 795 aa18.61■□□□□ 0.57
LETMD1-220ENST00000549686 B3GAT3O94766 335 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 CYLC1P35663 651 aaPredicted RBP18.6■□□□□ 0.57
LETMD1-220ENST00000549686 USP8P40818 1118 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 PTK2Q05397 1052 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 INCA1Q0VD86 236 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 TDRD12Q587J7 1177 aaKnown RBP18.6■□□□□ 0.57
LETMD1-220ENST00000549686 TMEM240Q5SV17 173 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 E4F1Q66K89 784 aaPredicted RBP18.6■□□□□ 0.57
LETMD1-220ENST00000549686 HGSNATQ68CP4 663 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 OTOP2Q7RTS6 562 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 LIMS2Q7Z4I7 341 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 ZNF677Q86XU0 584 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 CMTR2Q8IYT2 770 aaKnown RBP18.6■□□□□ 0.57
LETMD1-220ENST00000549686 TMEM86AQ8N2M4 240 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 APPL2Q8NEU8 664 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 PHOSPHO2Q8TCD6 241 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 CCDC42Q96M95 316 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 COLEC11Q9BWP8 271 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 SMYD3Q9H7B4 428 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 DSEQ9UL01 958 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 ZMYND8Q9ULU4 1186 aaPredicted RBP18.6■□□□□ 0.57
LETMD1-220ENST00000549686 BARX2Q9UMQ3 279 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms