RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ZNF197O14709 1029 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 N4BP3O15049 544 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 MOSPD3O75425 235 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 MED24O75448 989 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 RPP40O75818 363 aaKnown RBP13.38□□□□□ -0.27
DDX54-206ENST00000549271 LRG1P02750 347 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 CYP11B2P19099 503 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 NAMPTP43490 491 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 MCM2P49736 904 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 NBR1Q14596 966 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 TTC38Q5R3I4 469 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 TCEAL6Q6IPX3 200 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 TXNDC11Q6PKC3 985 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 CDR2LQ86X02 465 aaPredicted RBP13.38□□□□□ -0.27
DDX54-206ENST00000549271 TCEAL3Q969E4 200 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 ZC3H10Q96K80 434 aaKnown RBP13.38□□□□□ -0.27
DDX54-206ENST00000549271 CORO1BQ9BR76 489 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 SCNM1Q9BWG6 230 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 CCDC113Q9H0I3 377 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 PDZD7Q9H5P4 517 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 C8orf33Q9H7E9 229 aaPredicted RBP13.38□□□□□ -0.27
DDX54-206ENST00000549271 HELZ2Q9BYK8 2649 aaKnown RBP13.38□□□□□ -0.27
DDX54-206ENST00000549271 MYBPHLA2RUH7 354 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 TTLL13PA6NNM8 815 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 TMEM189-UBE2V1I3L0A0 370 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 AKAP3O75969 853 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 ABLIM3O94929 683 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 THP07101 528 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 OR52Z1P0C646 297 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 IGFBP6P24592 240 aaPredicted RBP13.37□□□□□ -0.27
DDX54-206ENST00000549271 GJB2P29033 226 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 SOX9P48436 509 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 PRPF4BQ13523 1007 aaKnown RBP13.37□□□□□ -0.27
DDX54-206ENST00000549271 CCINQ13939 588 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 MAPK6Q16659 721 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 PDZD4Q76G19 769 aaPredicted RBP13.37□□□□□ -0.27
DDX54-206ENST00000549271 SYNPOQ8N3V7 929 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 ZNF461Q8TAF7 563 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 ERMNQ8TAM6 284 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
DDX54-206ENST00000549271 EDEM2Q9BV94 578 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 CXCL16Q9H2A7 254 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 PCDHB6Q9Y5E3 794 aa13.37□□□□□ -0.27
DDX54-206ENST00000549271 SLC38A8A6NNN8 435 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 C4orf47A7E2U8 309 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 HEPACAM2A8MVW5 462 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 CHADO15335 359 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 EXTL3O43909 919 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 PRKCBP05771 671 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 CEACAM1P13688 526 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 CTHP32929 405 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 EFNA5P52803 228 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 ROR1Q01973 937 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 FCHO2Q0JRZ9 810 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 GNL2Q13823 731 aaKnown RBP13.36□□□□□ -0.27
DDX54-206ENST00000549271 PPP2R5AQ15172 486 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 SH3PXD2AQ5TCZ1 1133 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 SLC8B1Q6J4K2 584 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 PADI6Q6TGC4 694 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 CD300LGQ6UXG3 332 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 ANKS3Q6ZW76 656 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 MAEAQ7L5Y9 396 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 RALGPS2Q86X27 583 aaPredicted RBP13.36□□□□□ -0.27
DDX54-206ENST00000549271 TCEAL8Q8IYN2 117 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 ZSCAN18Q8TBC5 510 aaPredicted RBP13.36□□□□□ -0.27
DDX54-206ENST00000549271 CSGALNACT1Q8TDX6 532 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 BSNDQ8WZ55 320 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 RSPRY1Q96DX4 576 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 ADPGKQ9BRR6 497 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 SNTG2Q9NY99 539 aa13.36□□□□□ -0.27
DDX54-206ENST00000549271 ATG2BQ96BY7 2078 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 ARHGEF35A5YM69 484 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 SPECC1L-ADORA2AF8WAN1 911 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 PRRG1O14668 218 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 RECQL4O94761 1208 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 CCDC192P0DO97 292 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 ATF2P15336 505 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 CSRP1P21291 193 aaKnown RBP13.35□□□□□ -0.27
DDX54-206ENST00000549271 TKTP29401 623 aaKnown RBP13.35□□□□□ -0.27
DDX54-206ENST00000549271 PXNP49023 591 aaPredicted RBP13.35□□□□□ -0.27
DDX54-206ENST00000549271 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.271e-7■■■■■ 29.9
DDX54-206ENST00000549271 KPNA1P52294 538 aaPredicted RBP13.35□□□□□ -0.27
DDX54-206ENST00000549271 EPHA5P54756 1037 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 DCAF4L1Q3SXM0 396 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 SOWAHCQ53LP3 525 aaPredicted RBP13.35□□□□□ -0.27
DDX54-206ENST00000549271 CYP4A22Q5TCH4 519 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 DAB2IPQ5VWQ8 1189 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 HAUS3Q68CZ6 603 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 HS6ST3Q8IZP7 471 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 DEPTORQ8TB45 409 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 E2F7Q96AV8 911 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 NOL7Q9UMY1 257 aaKnown RBP13.35□□□□□ -0.27
DDX54-206ENST00000549271 KIF3AQ9Y496 699 aa13.35□□□□□ -0.27
DDX54-206ENST00000549271 NUP210Q8TEM1 1887 aaPredicted RBP13.35□□□□□ -0.27
DDX54-206ENST00000549271 ASCC3Q8N3C0 2202 aaKnown RBP13.35□□□□□ -0.27
DDX54-206ENST00000549271 PCNX2A6NKB5 2137 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 SEC24AO95486 1093 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 EDN1P05305 212 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 ELF1P32519 619 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms