RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 TMEM139Q8IV31 216 aa15.16■□□□□ 0.02
CACNB3-211ENST00000549226 LRRC43Q8N309 656 aa15.16■□□□□ 0.02
CACNB3-211ENST00000549226 FAM84AQ96KN4 292 aa15.16■□□□□ 0.02
CACNB3-211ENST00000549226 KCNF1Q9H3M0 494 aa15.16■□□□□ 0.02
CACNB3-211ENST00000549226 INPP5FQ9Y2H2 1132 aa15.16■□□□□ 0.02
CACNB3-211ENST00000549226 MKI67P46013 3256 aaKnown RBP15.16■□□□□ 0.02
CACNB3-211ENST00000549226 TMEM189-UBE2V1I3L0A0 370 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 FOXN3O00409 490 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-211ENST00000549226 PODXLO00592 558 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 CCP110O43303 1012 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 LRRN2O75325 713 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 ITGB8P26012 769 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 GUCY2FP51841 1108 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 SOX4Q06945 474 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-211ENST00000549226 DSC1Q08554 894 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 GOLGA8FQ08AF8 430 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 GOLGA8DPQ0D2H9 430 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 UPP1Q16831 310 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 TDRD12Q587J7 1177 aaKnown RBP15.15■□□□□ 0.02
CACNB3-211ENST00000549226 WDR59Q6PJI9 974 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 IRF2BP2Q7Z5L9 587 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 ZNF677Q86XU0 584 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 C7orf61Q8IZ16 206 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 TXLNBQ8N3L3 684 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 TOP6BLQ8N6T0 577 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 UBR7Q8N806 425 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 VWCEQ96DN2 955 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 CCDC42Q96M95 316 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 FAM193BQ96PV7 902 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-211ENST00000549226 TMEM175Q9BSA9 504 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 CXCL16Q9H2A7 254 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 MTIF3Q9H2K0 278 aaKnown RBP15.15■□□□□ 0.02
CACNB3-211ENST00000549226 DEF6Q9H4E7 631 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 RNF19AQ9NV58 838 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 MIOSQ9NXC5 875 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 NXF1Q9UBU9 619 aaKnown RBP15.15■□□□□ 0.02
CACNB3-211ENST00000549226 AJAP1Q9UKB5 411 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-211ENST00000549226 ZKSCAN5Q9Y2L8 839 aa15.15■□□□□ 0.02
CACNB3-211ENST00000549226 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.15■□□□□ 0.02
CACNB3-211ENST00000549226 ANK1P16157 1881 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 KPNA7A9QM74 516 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 TACC1O75410 805 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 POMCP01189 267 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 FGFR1P11362 822 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 KRT5P13647 590 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 ACO1P21399 889 aaKnown RBP15.14■□□□□ 0.01
CACNB3-211ENST00000549226 AARSP49588 968 aaKnown RBP eCLIP15.14■□□□□ 0.01
CACNB3-211ENST00000549226 PDE6CP51160 858 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 LILRA4P59901 499 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 PTK2Q05397 1052 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 RNASELQ05823 741 aaKnown RBP15.14■□□□□ 0.01
CACNB3-211ENST00000549226 INCA1Q0VD86 236 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 TCTN1Q2MV58 587 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 HGSNATQ68CP4 663 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 DCLRE1AQ6PJP8 1040 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 KAT5Q92993 513 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 TOP1MTQ969P6 601 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 CASD1Q96PB1 797 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 NHEJ1Q9H9Q4 299 aaPredicted RBP15.14■□□□□ 0.01
CACNB3-211ENST00000549226 LUC7LQ9NQ29 371 aaKnown RBP15.14■□□□□ 0.01
CACNB3-211ENST00000549226 CISHQ9NSE2 258 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 TBC1D13Q9NVG8 400 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 DSEQ9UL01 958 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 PCDHB4Q9Y5E5 795 aa15.14■□□□□ 0.01
CACNB3-211ENST00000549226 HUS1O60921 280 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 FGBP02675 491 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 PAEPP09466 180 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 IBSPP21815 317 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-211ENST00000549226 USP8P40818 1118 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 ZNF132P52740 706 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 WDR5P61964 334 aaKnown RBP15.13■□□□□ 0.01
CACNB3-211ENST00000549226 BMS1Q14692 1282 aaKnown RBP15.13■□□□□ 0.01
CACNB3-211ENST00000549226 E4F1Q66K89 784 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-211ENST00000549226 PPP1R2P3Q6NXS1 205 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 LIMS2Q7Z4I7 341 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 UNC93AQ86WB7 457 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 TMEM86AQ8N2M4 240 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 MMS19Q96T76 1030 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 LBHD1Q9BQE6 289 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-211ENST00000549226 GOLGA2P5Q9HBQ8 144 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.13■□□□□ 0.01
CACNB3-211ENST00000549226 ARHGAP20Q9P2F6 1191 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 KIAA1257Q9ULG3 409 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 BARX2Q9UMQ3 279 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-211ENST00000549226 SNX9Q9Y5X1 595 aa15.13■□□□□ 0.01
CACNB3-211ENST00000549226 CASTOR2A6NHX0 329 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 EIF3CLB5ME19 914 aaKnown RBP15.12■□□□□ 0.01
CACNB3-211ENST00000549226 TRAPPC3O43617 180 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 AKR1B10O60218 316 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 CILPO75339 1184 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 CAPN15O75808 1086 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 DGKIO75912 1065 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 B3GAT3O94766 335 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 CLCNKBP51801 687 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 AFF1P51825 1210 aaKnown RBP15.12■□□□□ 0.01
CACNB3-211ENST00000549226 KRT83P78385 493 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 ARID5AQ03989 594 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 C10orf76Q5T2E6 689 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 TMEM270Q6UE05 265 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 SCARA5Q6ZMJ2 495 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms