RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PLA2G2FQ9BZM2 168 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 ZHX3Q9H4I2 956 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 RPF1Q9H9Y2 349 aaKnown RBP18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 CEP72Q9P209 647 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 CPSF3Q9UKF6 684 aaKnown RBP18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 MAFFQ9ULX9 164 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 YIPF1Q9Y548 306 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 TIMM13Q9Y5L4 95 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 CLIC4Q9Y696 253 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 TICRRQ7Z2Z1 1910 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 TISP43B9A030 160 aa18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 XPOTO43592 962 aaKnown RBP18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 NFICP08651 508 aa18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 PFKPQ01813 784 aa18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 TWF1Q12792 350 aa18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 RESTQ13127 1097 aa18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 SPATA1Q5VX52 437 aa18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 PDZD4Q76G19 769 aaPredicted RBP18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 EPSTI1Q96J88 318 aa18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 TSPAN18Q96SJ8 248 aa18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 ST6GALNAC4Q9H4F1 302 aa18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 FBXO2Q9UK22 296 aaPredicted RBP18.9■□□□□ 0.62
CHMP1A-205ENST00000548650 NUP210Q8TEM1 1887 aaPredicted RBP18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 KANSL1LA0AUZ9 987 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 MOSPD3O75425 235 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 MICAL2O94851 1124 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 OR4Q2P0C623 313 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 PDCP20941 246 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 MARCKSP29966 332 aaPredicted RBP18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 ABCD1P33897 745 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 EPHA5P54756 1037 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 ZC2HC1CQ53FD0 456 aaPredicted RBP18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 SLC44A4Q53GD3 710 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 TANGO2Q6ICL3 276 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 JADE1Q6IE81 842 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 HS6ST3Q8IZP7 471 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 ELSPBP1Q96BH3 223 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 CRISPLD1Q9H336 500 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 STK17AQ9UEE5 414 aa18.89■□□□□ 0.61
CHMP1A-205ENST00000548650 F5P12259 2224 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 OTOGLQ3ZCN5 2332 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 EP300Q09472 2414 aaPredicted RBP18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 ANKRD63C9JTQ0 380 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 ZNF197O14709 1029 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 SPTLC1O15269 473 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 TYMPP19971 482 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 DDIT3P35638 169 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 FAM78AQ5JUQ0 283 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 C9orf57Q5W0N0 161 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 SFR1Q86XK3 245 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 CD302Q8IX05 232 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 ELMOD1Q8N336 334 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 ASB16Q96NS5 453 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 PGLYRP2Q96PD5 576 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 OXCT2Q9BYC2 517 aaPredicted RBP18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 IKZF4Q9H2S9 585 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 LTB4R2Q9NPC1 389 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 MTF2Q9Y483 593 aaPredicted RBP18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 STYXL1Q9Y6J8 313 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 ZNF292O60281 2723 aa18.88■□□□□ 0.61
CHMP1A-205ENST00000548650 OR6C75A6NL08 312 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 NCANO14594 1321 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 PPP1R37O75864 691 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 ACOT2P49753 483 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 LILRA4P59901 499 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 TMEM132DQ14C87 1099 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 CYP4A22Q5TCH4 519 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 OVOS1Q6IE37 1185 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 IQCEQ6IPM2 695 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 FAM173BQ6P4H8 233 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 DSTYKQ6XUX3 929 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 TPRG1Q6ZUI0 275 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 USP37Q86T82 979 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 C1orf210Q8IVY1 113 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 KRI1Q8N9T8 703 aaKnown RBP18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 LEMD2Q8NC56 503 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 DNASE1L2Q92874 299 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 HVCN1Q96D96 273 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 FAM212AQ96EL1 285 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 OSBPL6Q9BZF3 934 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 DNAJC25Q9H1X3 360 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 ASAH2Q9NR71 780 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 DERAQ9Y315 318 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 SRPRBQ9Y5M8 271 aaKnown RBP18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 R4GN57 208 aa18.87■□□□□ 0.61
CHMP1A-205ENST00000548650 ANO9A1A5B4 782 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 MTMR11A4FU01 709 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 SHISA7A6NL88 538 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 ODC1P11926 461 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 SYT1P21579 422 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 CD72P21854 359 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 GPR17Q13304 367 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 GRM2Q14416 872 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 UBXN2BQ14CS0 331 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 ADALQ6DHV7 355 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 DYMQ7RTS9 669 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 TMC8Q8IU68 726 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 MAML2Q8IZL2 1156 aaPredicted RBP18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 TTC9BQ8N6N2 239 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 SHKBP1Q8TBC3 707 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms