RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 STAG1Q8WVM7 1258 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 CASKIN2Q8WXE0 1202 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 COA7Q96BR5 231 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 DCLRE1CQ96SD1 692 aaKnown RBP3.08□□□□□ -1.92
CEP290-204ENST00000547926 PCDHB1Q9Y5F3 818 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 TCRBV7S2A1N4TA0A589 114 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 AGAP9Q5VTM2 703 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 EFCAB2Q5VUJ9 269 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 KAT5Q92993 513 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 RGMAQ96B86 450 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 CYFIP2Q96F07 1278 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 TMX3Q96JJ7 454 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 ZSWIM1Q9BR11 485 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 WACQ9BTA9 647 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 SLC13A1Q9BZW2 595 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 BRINP2Q9C0B6 783 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 MANSC1Q9H8J5 431 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 LMTK3Q96Q04 1460 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 GAGE12BA1L429 117 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 GAGE12HA6NDE8 117 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 ELANEP08246 267 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 SBK3P0C264 359 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 IBSPP21815 317 aaPredicted RBP3.07□□□□□ -1.92
CEP290-204ENST00000547926 CCND1P24385 295 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 SLC6A4P31645 630 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 CACNA2D1P54289 1103 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 ZNF280AP59817 542 aaPredicted RBP3.07□□□□□ -1.92
CEP290-204ENST00000547926 KLF9Q13886 244 aaPredicted RBP3.07□□□□□ -1.92
CEP290-204ENST00000547926 UAP1L1Q3KQV9 507 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 TSHZ3Q63HK5 1081 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 SEM1Q6ZVN7 128 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 MIGA2Q7L4E1 593 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 PLXDC1Q8IUK5 500 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 OR56A1Q8NGH5 318 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 IFI44Q8TCB0 444 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 HDAC10Q969S8 669 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 DMRTA2Q96SC8 542 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 TDP1Q9NUW8 608 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 KLHL11Q9NVR0 708 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 ARPP21Q9UBL0 812 aaPredicted RBP3.07□□□□□ -1.92
CEP290-204ENST00000547926 SAP30BPQ9UHR5 308 aaKnown RBP3.07□□□□□ -1.92
CEP290-204ENST00000547926 hCG_2014768A0A024R1R8 64 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 KIAA0391O15091 583 aaKnown RBP3.07□□□□□ -1.92
CEP290-204ENST00000547926 POMCP01189 267 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 SLC16A1P53985 500 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 CDC42EP1Q00587 391 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 C11orf87Q6NUJ2 197 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 RHOT2Q8IXI1 618 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 DRC7Q8IY82 874 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 PPP1R10Q96QC0 940 aaKnown RBP3.07□□□□□ -1.92
CEP290-204ENST00000547926 ALOXE3Q9BYJ1 711 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 GSTO2Q9H4Y5 243 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 USP25Q9UHP3 1055 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 LUC7L2Q9Y383 392 aaKnown RBP3.07□□□□□ -1.92
CEP290-204ENST00000547926 AATKQ6ZMQ8 1374 aa3.07□□□□□ -1.92
CEP290-204ENST00000547926 CDHR4A6H8M9 788 aa3.06□□□□□ -1.92
CEP290-204ENST00000547926 DIRC3C9JPN6 131 aa3.06□□□□□ -1.92
CEP290-204ENST00000547926 FXR1P51114 621 aaKnown RBP eCLIP3.06□□□□□ -1.92
CEP290-204ENST00000547926 ADKP55263 362 aaKnown RBP3.06□□□□□ -1.92
CEP290-204ENST00000547926 CTXN1P60606 82 aa3.06□□□□□ -1.92
CEP290-204ENST00000547926 EXOSC10Q01780 885 aaKnown RBP3.06□□□□□ -1.92
CEP290-204ENST00000547926 RSPH3Q86UC2 560 aa3.06□□□□□ -1.92
CEP290-204ENST00000547926 MRGPRX4Q96LA9 322 aa3.06□□□□□ -1.92
CEP290-204ENST00000547926 C11orf54Q9H0W9 315 aaPredicted RBP3.06□□□□□ -1.92
CEP290-204ENST00000547926 FAM30AQ9NZY2 134 aa3.06□□□□□ -1.92
CEP290-204ENST00000547926 RNF181Q9P0P0 153 aa3.06□□□□□ -1.92
CEP290-204ENST00000547926 ATP11BQ9Y2G3 1177 aa3.06□□□□□ -1.92
CEP290-204ENST00000547926 LRRC14BA6NHZ5 514 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 GRM6O15303 877 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 TEX33O43247 280 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 ITPKBP27987 946 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 RECQLP46063 649 aaPredicted RBP3.05□□□□□ -1.92
CEP290-204ENST00000547926 ANAPC15P60006 121 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 NOMO3P69849 1222 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 HSD11B2P80365 405 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 ETFDHQ16134 617 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 FLYWCH1Q4VC44 716 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 NOMO2Q5JPE7 1267 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 DACT2Q5SW24 774 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 B3GNTL1Q67FW5 361 aaPredicted RBP3.05□□□□□ -1.92
CEP290-204ENST00000547926 Q6ZNX1 250 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 TECPR1Q7Z6L1 1165 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 MAPKAPK5Q8IW41 473 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 MARS2Q96GW9 593 aaKnown RBP3.05□□□□□ -1.92
CEP290-204ENST00000547926 CLPTM1LQ96KA5 538 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 VRK1Q99986 396 aaPredicted RBP3.05□□□□□ -1.92
CEP290-204ENST00000547926 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.05□□□□□ -1.92
CEP290-204ENST00000547926 FPGT-TNNI3KV9GXZ4 949 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 A0A1B0GTW7 788 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 SNUPNO95149 360 aaKnown RBP3.05□□□□□ -1.92
CEP290-204ENST00000547926 CFIP05156 583 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 GCSHP23434 173 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 NEK2P51955 445 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 DSC2Q02487 901 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 CREMQ03060 361 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 ZNF517Q6ZMY9 492 aaPredicted RBP3.05□□□□□ -1.92
CEP290-204ENST00000547926 CATIPQ7Z7H3 387 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 ZBTB46Q86UZ6 589 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 MIER2Q8N344 545 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 CPA6Q8N4T0 437 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms