RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 SEPT11Q9NVA2 429 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 COQ4Q9Y3A0 265 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 RRN3P2A6NIE6 340 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 KIAA0391O15091 583 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 CLDN3O15551 220 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 NBNO60934 754 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 CSDE1O75534 798 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 CTSHP09668 335 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 TMEM253P0C7T8 217 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 SELPP16109 830 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 MBTD1Q05BQ5 628 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 MBTPS1Q14703 1052 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 ZBTB41Q5SVQ8 909 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 SERINC5Q86VE9 423 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 KIAA0319LQ8IZA0 1049 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 NFKBIZQ9BYH8 718 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 TRANK1O15050 2925 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 NRCAMQ92823 1304 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 ACKR2O00590 384 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 B4GALT5O43286 388 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 TOM1L1O75674 476 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 DLATP10515 647 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 HARSP12081 509 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 HOXC8P31273 242 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 USP8P40818 1118 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 RABGGTBP53611 331 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 MFAP3P55082 362 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 SMAD3P84022 425 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 POU5F1BQ06416 359 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 ENPEPQ07075 957 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 TRAF7Q6Q0C0 670 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 ZBTB33Q86T24 672 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 KAT5Q92993 513 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 TCHPQ9BT92 498 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 LRRC1Q9BTT6 524 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 TTYH1Q9H313 450 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.74■□□□□ 0.436e-6■■■■■ 48.1
CHMP1A-204ENST00000547687 TOPORSQ9NS56 1045 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 MTMR10Q9NXD2 777 aa17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 SPTBN5Q9NRC6 3674 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-204ENST00000547687 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 ZMYND10O75800 440 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 KIF4AO95239 1232 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 LDHAP00338 332 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 DNAJB2P25686 324 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 PHKA2P46019 1235 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 GPC3P51654 580 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 WNT7BP56706 349 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 SEZ6Q53EL9 994 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 RUFY4Q6ZNE9 571 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 TMCO2Q7Z6W1 182 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 SLFN11Q7Z7L1 901 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 SYCE1Q8N0S2 351 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 PPM1KQ8N3J5 372 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 SLC20A1Q8WUM9 679 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 CTNNBL1Q8WYA6 563 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 PBX4Q9BYU1 374 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 UBXN6Q9BZV1 441 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 RAB20Q9NX57 234 aa17.73■□□□□ 0.43
CHMP1A-204ENST00000547687 CES2O00748 559 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 MYOGP15173 224 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 PRPF4BQ13523 1007 aaKnown RBP17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 SMC1AQ14683 1233 aaKnown RBP17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 MAP9Q49MG5 647 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 ZNF697Q5TEC3 545 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 CCNI2Q6ZMN8 369 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 SV2AQ7L0J3 742 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 FAM71AQ8IYT1 594 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 FBXL13Q8NEE6 735 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 SLC35G2Q8TBE7 412 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 KREMEN1Q96MU8 473 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 GOLPH3Q9H4A6 298 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 ST7Q9NRC1 585 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 RBM12Q9NTZ6 932 aaKnown RBP17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 TAS2R14Q9NYV8 317 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 NCANO14594 1321 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 ABLIM1O14639 778 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 KCNK3O14649 394 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 ABCB4P21439 1286 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 ATF7IP2Q5U623 682 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 GPR153Q6NV75 609 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 TSHZ1Q6ZSZ6 1077 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 PEX26Q7Z412 305 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 CDR2LQ86X02 465 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 IFNLR1Q8IU57 520 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 TAS1R2Q8TE23 839 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 NLRP7Q8WX94 980 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 RFFLQ8WZ73 363 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 PBKQ96KB5 322 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 FAM84AQ96KN4 292 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 GUCD1Q96NT3 240 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 NT5C1BQ96P26 610 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 PDE11AQ9HCR9 933 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 RBAKQ9NYW8 714 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 SLC4A7Q9Y6M7 1214 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 MICAL3Q7RTP6 2002 aa17.72■□□□□ 0.43
CHMP1A-204ENST00000547687 MBLAC1A4D2B0 266 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 ANKRD62A6NC57 917 aa17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 ADAM17P78536 824 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms