RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ACTN2P35609 894 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 ADCY8P40145 1251 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 RPL21P46778 160 aaKnown RBP13.53□□□□□ -0.24
SCAF11-209ENST00000547018 GCNT1Q02742 428 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 ITIH3Q06033 890 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 MDM1Q8TC05 714 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 NAP1L3Q99457 506 aaPredicted RBP13.53□□□□□ -0.24
SCAF11-209ENST00000547018 LPIN3Q9BQK8 851 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 NIFKQ9BYG3 293 aaKnown RBP13.53□□□□□ -0.24
SCAF11-209ENST00000547018 RRAGCQ9HB90 399 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 ERAP1Q9NZ08 941 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 AGAP1Q9UPQ3 857 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 DOCK1Q14185 1865 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 LRRD1A4D1F6 860 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 H3BRB1 525 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 HGSO14964 777 aaPredicted RBP13.53□□□□□ -0.24
SCAF11-209ENST00000547018 PPFIA1Q13136 1202 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 TARBP2Q15633 366 aaKnown RBP13.53□□□□□ -0.24
SCAF11-209ENST00000547018 TXNRD3NBQ6F5E7 133 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 HEXIM2Q96MH2 286 aaKnown RBP13.53□□□□□ -0.24
SCAF11-209ENST00000547018 ERP44Q9BS26 406 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 SEMA4AQ9H3S1 761 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 TUT1Q9H6E5 874 aaKnown RBP13.53□□□□□ -0.24
SCAF11-209ENST00000547018 TBK1Q9UHD2 729 aa13.53□□□□□ -0.24
SCAF11-209ENST00000547018 LACTBL1A8MY62 500 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 ZBTB42B2RXF5 422 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 GOLGA8MH3BSY2 632 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 STAG3L1P0CL83 205 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 MXD4Q14582 209 aaPredicted RBP13.52□□□□□ -0.24
SCAF11-209ENST00000547018 UAP1Q16222 522 aaPredicted RBP13.52□□□□□ -0.24
SCAF11-209ENST00000547018 DNAJC24Q6P3W2 148 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 MGARPQ8TDB4 240 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 ANKRD36BP1Q96IX9 119 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 CDT1Q9H211 546 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 SMYD3Q9H7B4 428 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 VIPAS39Q9H9C1 493 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 FAM49BQ9NUQ9 324 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.52□□□□□ -0.24
SCAF11-209ENST00000547018 TMEM59LQ9UK28 342 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 MROH7Q68CQ1 1323 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 CNTNAP2Q9UHC6 1331 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 CTNNA2P26232 953 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 POLR2BP30876 1174 aaKnown RBP13.52□□□□□ -0.24
SCAF11-209ENST00000547018 BEX3Q00994 111 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 JADE1Q6IE81 842 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 ERICH1Q86X53 443 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 BRI3BPQ8WY22 251 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 FAM167AQ96KS9 214 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 RAB17Q9H0T7 212 aa13.52□□□□□ -0.24
SCAF11-209ENST00000547018 KIF13BQ9NQT8 1826 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 ANXA13P27216 316 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 EFNA5P52803 228 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 PTENP60484 403 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 SNRPFP62306 86 aaKnown RBP13.52□□□□□ -0.25
SCAF11-209ENST00000547018 KRT17Q04695 432 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 ADCY2Q08462 1091 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 CALCOCO2Q13137 446 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 ZNF667Q5HYK9 610 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 CYP4F22Q6NT55 531 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 BRSK2Q8IWQ3 736 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 C10orf67Q8IYJ2 551 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 ABRAQ8N0Z2 381 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 C12orf29Q8N999 325 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 WHAMMQ8TF30 809 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 TCP11Q8WWU5 503 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 OSMRQ99650 979 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 RASAL2Q9UJF2 1139 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 KAT6AQ92794 2004 aa13.52□□□□□ -0.25
SCAF11-209ENST00000547018 MIF4GDA9UHW6 222 aaKnown RBP13.51□□□□□ -0.25
SCAF11-209ENST00000547018 ZSCAN5DPP0CG00 497 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 EDNRBP24530 442 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 AKAP5P24588 427 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 PEX5P50542 639 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 BPIFB4P59827 614 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 MAGOHP61326 146 aaKnown RBP13.51□□□□□ -0.25
SCAF11-209ENST00000547018 ZNF200P98182 395 aaPredicted RBP13.51□□□□□ -0.25
SCAF11-209ENST00000547018 TFDP1Q14186 410 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 SCYL2Q6P3W7 929 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 LRRC31Q6UY01 552 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 ZNF572Q7Z3I7 529 aaPredicted RBP13.51□□□□□ -0.25
SCAF11-209ENST00000547018 PIK3R5Q8WYR1 880 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 LRRC45Q96CN5 670 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 TRIM6Q9C030 488 aaPredicted RBP13.51□□□□□ -0.25
SCAF11-209ENST00000547018 ZNF148Q9UQR1 794 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 RBBP6Q7Z6E9 1792 aaKnown RBP13.51□□□□□ -0.25
SCAF11-209ENST00000547018 HTTP42858 3142 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 HCRTO43612 131 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 HBP1O60381 514 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 KRT1P04264 644 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 ETS1P14921 441 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 NR1D1P20393 614 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 ACO1P21399 889 aaKnown RBP13.51□□□□□ -0.25
SCAF11-209ENST00000547018 ECHS1P30084 290 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 IFNAR2P48551 515 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 NOMO3P69849 1222 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 CCNA1P78396 465 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 SLC29A2Q14542 456 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 DENND1BQ6P3S1 775 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 MPZL3Q6UWV2 235 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms