RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 LRRC43Q8N309 656 aa12.06□□□□□ -0.48
TROAP-204ENST00000546776 GSTCDQ8NEC7 633 aa12.06□□□□□ -0.48
TROAP-204ENST00000546776 C18orf25Q96B23 403 aaPredicted RBP12.06□□□□□ -0.48
TROAP-204ENST00000546776 ZNF689Q96CS4 500 aaPredicted RBP12.06□□□□□ -0.48
TROAP-204ENST00000546776 C11orf84Q9BUA3 381 aaPredicted RBP12.06□□□□□ -0.48
TROAP-204ENST00000546776 PLVAPQ9BX97 442 aa12.06□□□□□ -0.48
TROAP-204ENST00000546776 NUCKS1Q9H1E3 243 aaKnown RBP12.06□□□□□ -0.48
TROAP-204ENST00000546776 CEP72Q9P209 647 aa12.06□□□□□ -0.48
TROAP-204ENST00000546776 TUBGCP4Q9UGJ1 667 aa12.06□□□□□ -0.48
TROAP-204ENST00000546776 COL4A6Q14031 1691 aa12.06□□□□□ -0.48
TROAP-204ENST00000546776 A0A1W2PQJ5 194 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 ARHGEF37A1IGU5 675 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 TBKBP1A7MCY6 615 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 ARHGEF15O94989 841 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 VNN1O95497 513 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 ASS1P00966 412 aaKnown RBP12.05□□□□□ -0.48
TROAP-204ENST00000546776 CST3P01034 146 aaPredicted RBP12.05□□□□□ -0.48
TROAP-204ENST00000546776 PTMAP06454 111 aaKnown RBP12.05□□□□□ -0.48
TROAP-204ENST00000546776 UCHL3P15374 230 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 POU3F3P20264 500 aaPredicted RBP12.05□□□□□ -0.48
TROAP-204ENST00000546776 MFAP3P55082 362 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 GSDMDP57764 484 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 MYL6P60660 151 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 YWHAEP62258 255 aaKnown RBP12.05□□□□□ -0.48
TROAP-204ENST00000546776 TNNC1P63316 161 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 GCNT1Q02742 428 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 GPM6BQ13491 265 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 SV2CQ496J9 727 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 PAN2Q504Q3 1202 aaKnown RBP12.05□□□□□ -0.48
TROAP-204ENST00000546776 C9orf57Q5W0N0 161 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 SMYD5Q6GMV2 418 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 CNGA4Q8IV77 575 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 CRIPAKQ8N1N5 446 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 PPM1KQ8N3J5 372 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 SPC24Q8NBT2 197 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 LMO3Q8TAP4 145 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 SEMA4DQ92854 862 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 HPDLQ96IR7 371 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 CASD1Q96PB1 797 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 SPAG5Q96R06 1193 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 C17orf80Q9BSJ5 609 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 CXCL16Q9H2A7 254 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 VRTNQ9H8Y1 702 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 TBC1D13Q9NVG8 400 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 SIX4Q9UIU6 781 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 LUC7L2Q9Y383 392 aaKnown RBP12.05□□□□□ -0.48
TROAP-204ENST00000546776 PCDHB12Q9Y5F1 795 aa12.05□□□□□ -0.48
TROAP-204ENST00000546776 PTPRSQ13332 1948 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 ANO9A1A5B4 782 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 AKR1B15C9JRZ8 316 aaPredicted RBP12.04□□□□□ -0.48
TROAP-204ENST00000546776 C5orf67F2Z3F1 127 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 RFXAPO00287 272 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 PODXLO00592 558 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 PIRO00625 290 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 NRDCO43847 1150 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 BMPR1AP36894 532 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 TAF6P49848 677 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 KLK7P49862 253 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 AFF1P51825 1210 aaKnown RBP12.04□□□□□ -0.48
TROAP-204ENST00000546776 POLR2FP61218 127 aaKnown RBP12.04□□□□□ -0.48
TROAP-204ENST00000546776 ZBED6P86452 979 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 LRMPQ12912 555 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 ADGRE1Q14246 886 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 PTPN21Q16825 1174 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 MICALL1Q8N3F8 863 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 TTC39CQ8N584 583 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 GDPD5Q8WTR4 605 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 CPLX3Q8WVH0 158 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 PPM1EQ8WY54 764 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 CLP1Q92989 425 aaKnown RBP12.04□□□□□ -0.48
TROAP-204ENST00000546776 JAKMIP2Q96AA8 810 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 PDLIM2Q96JY6 352 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 PI4K2AQ9BTU6 479 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 DNAI2Q9GZS0 605 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 NIF3L1Q9GZT8 377 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 FAM124BQ9H5Z6 455 aaPredicted RBP12.04□□□□□ -0.48
TROAP-204ENST00000546776 RC3H2Q9HBD1 1191 aaKnown RBP12.04□□□□□ -0.48
TROAP-204ENST00000546776 SIX2Q9NPC8 291 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 UBE2TQ9NPD8 197 aaPredicted RBP12.04□□□□□ -0.48
TROAP-204ENST00000546776 RNF19AQ9NV58 838 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 MIOSQ9NXC5 875 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 DNAJC12Q9UKB3 198 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 MYO6Q9UM54 1294 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 CAPN11Q9UMQ6 739 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 PLAGL2Q9UPG8 496 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 NUB1Q9Y5A7 615 aa12.04□□□□□ -0.48
TROAP-204ENST00000546776 CASTOR2A6NHX0 329 aa12.03□□□□□ -0.48
TROAP-204ENST00000546776 H3BNC9 293 aa12.03□□□□□ -0.48
TROAP-204ENST00000546776 GYPCP04921 128 aa12.03□□□□□ -0.48
TROAP-204ENST00000546776 CCDC172P0C7W6 258 aa12.03□□□□□ -0.48
TROAP-204ENST00000546776 LAG3P18627 525 aa12.03□□□□□ -0.48
TROAP-204ENST00000546776 CLCNKBP51801 687 aa12.03□□□□□ -0.48
TROAP-204ENST00000546776 GUCY2FP51841 1108 aa12.03□□□□□ -0.48
TROAP-204ENST00000546776 SOX4Q06945 474 aaPredicted RBP12.03□□□□□ -0.48
TROAP-204ENST00000546776 DSC1Q08554 894 aa12.03□□□□□ -0.48
TROAP-204ENST00000546776 TBX2Q13207 712 aaPredicted RBP12.03□□□□□ -0.48
TROAP-204ENST00000546776 RAPGEF1Q13905 1077 aa12.03□□□□□ -0.48
TROAP-204ENST00000546776 SKIV2LQ15477 1246 aaKnown RBP12.03□□□□□ -0.48
TROAP-204ENST00000546776 NAB2Q15742 525 aa12.03□□□□□ -0.48
TROAP-204ENST00000546776 WDR72Q3MJ13 1102 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms