RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 MRFAP1Q9Y605 127 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 CADPSQ9ULU8 1353 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 A0A1W2PS29 197 aa6.28□□□□□ -1.4
SNHG1-224ENST00000545688 SLC43A1O75387 559 aa6.28□□□□□ -1.4
SNHG1-224ENST00000545688 KCNA2P16389 499 aa6.28□□□□□ -1.4
SNHG1-224ENST00000545688 RARRES1P49788 294 aa6.28□□□□□ -1.4
SNHG1-224ENST00000545688 KRT85P78386 507 aa6.28□□□□□ -1.4
SNHG1-224ENST00000545688 SP5Q6BEB4 398 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-224ENST00000545688 ZNF365Q70YC5 407 aa6.28□□□□□ -1.4
SNHG1-224ENST00000545688 TMIEQ8NEW7 156 aa6.28□□□□□ -1.4
SNHG1-224ENST00000545688 PDLIM2Q96JY6 352 aa6.28□□□□□ -1.4
SNHG1-224ENST00000545688 DMRTA2Q96SC8 542 aa6.28□□□□□ -1.4
SNHG1-224ENST00000545688 CTTNBP2NLQ9P2B4 639 aa6.28□□□□□ -1.4
SNHG1-224ENST00000545688 PRAMEF33A0A0G2JMD5 474 aa6.27□□□□□ -1.41
SNHG1-224ENST00000545688 PRAMEF10O60809 474 aa6.27□□□□□ -1.41
SNHG1-224ENST00000545688 CD38P28907 300 aa6.27□□□□□ -1.41
SNHG1-224ENST00000545688 ELLP55199 621 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-224ENST00000545688 ODF1Q14990 250 aa6.27□□□□□ -1.41
SNHG1-224ENST00000545688 PTPN21Q16825 1174 aa6.27□□□□□ -1.41
SNHG1-224ENST00000545688 UAP1L1Q3KQV9 507 aa6.27□□□□□ -1.41
SNHG1-224ENST00000545688 PPP4R3AQ6IN85 833 aa6.27□□□□□ -1.41
SNHG1-224ENST00000545688 CLNKQ7Z7G1 428 aa6.27□□□□□ -1.41
SNHG1-224ENST00000545688 PNMA8AQ86V59 439 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-224ENST00000545688 CALCOCO1Q9P1Z2 691 aa6.27□□□□□ -1.41
SNHG1-224ENST00000545688 TNKSO95271 1327 aa6.26□□□□□ -1.41
SNHG1-224ENST00000545688 PEX1O43933 1283 aa6.26□□□□□ -1.41
SNHG1-224ENST00000545688 ZNF37AP17032 561 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-224ENST00000545688 IL12RB1P42701 662 aa6.26□□□□□ -1.41
SNHG1-224ENST00000545688 MC2RQ01718 297 aa6.26□□□□□ -1.41
SNHG1-224ENST00000545688 ZNF844Q08AG5 666 aa6.26□□□□□ -1.41
SNHG1-224ENST00000545688 CD300EQ496F6 205 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-224ENST00000545688 EFCAB2Q5VUJ9 269 aa6.26□□□□□ -1.41
SNHG1-224ENST00000545688 ARHGEF25Q86VW2 580 aa6.26□□□□□ -1.41
SNHG1-224ENST00000545688 PDPRQ8NCN5 879 aa6.26□□□□□ -1.41
SNHG1-224ENST00000545688 SLC17A8Q8NDX2 589 aa6.26□□□□□ -1.41
SNHG1-224ENST00000545688 NSUN7Q8NE18 718 aaKnown RBP6.26□□□□□ -1.41
SNHG1-224ENST00000545688 NSUN6Q8TEA1 469 aaKnown RBP6.26□□□□□ -1.41
SNHG1-224ENST00000545688 IMPG2Q9BZV3 1241 aa6.26□□□□□ -1.41
SNHG1-224ENST00000545688 INTS13Q9NVM9 706 aa6.26□□□□□ -1.41
SNHG1-224ENST00000545688 YY2O15391 372 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 SUN1O94901 812 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 IGLV2-14P01704 120 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 SRGNP10124 158 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 GATA3P23771 443 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 FOLR3P41439 243 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 CACNA2D1P54289 1103 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 RPS7P62081 194 aaKnown RBP6.25□□□□□ -1.41
SNHG1-224ENST00000545688 DSC2Q02487 901 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 FPGSQ05932 587 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 COLEC12Q5KU26 742 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 VWA1Q6PCB0 445 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 CFAP52Q8N1V2 620 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 SLC30A5Q8TAD4 765 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 LPIN2Q92539 896 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 LRIG1Q96JA1 1093 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 VRK1Q99986 396 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-224ENST00000545688 ADARB2Q9NS39 739 aaKnown RBP6.25□□□□□ -1.41
SNHG1-224ENST00000545688 SEMA4GQ9NTN9 838 aa6.25□□□□□ -1.41
SNHG1-224ENST00000545688 CFAP20Q9Y6A4 193 aaKnown RBP6.25□□□□□ -1.41
SNHG1-224ENST00000545688 CCDC195A0A1B0GUA6 201 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 ALG1L2C9J202 215 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 C1QL1O75973 258 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 MATN4O95460 622 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 ADKP55263 362 aaKnown RBP6.24□□□□□ -1.41
SNHG1-224ENST00000545688 KHDC1Q4VXA5 237 aaKnown RBP6.24□□□□□ -1.41
SNHG1-224ENST00000545688 KIAA0895LQ68EN5 471 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 ADGRG5Q8IZF4 528 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 NELL1Q92832 810 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 SMAD5Q99717 465 aaKnown RBP6.24□□□□□ -1.41
SNHG1-224ENST00000545688 SPATA5L1Q9BVQ7 753 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 SLC13A1Q9BZW2 595 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 KLK15Q9H2R5 256 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 NEU2Q9Y3R4 380 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 TNFRSF18Q9Y5U5 241 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 WASHC2CQ9Y4E1 1318 aa6.24□□□□□ -1.41
SNHG1-224ENST00000545688 E9PLN8 166 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 F2RL2O00254 374 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 PROM1O43490 865 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 ZRANB2O95218 330 aaKnown RBP eCLIP6.23□□□□□ -1.412e-9■■■■■ 30
SNHG1-224ENST00000545688 MALP21145 153 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 ANXA11P50995 505 aaKnown RBP6.23□□□□□ -1.41
SNHG1-224ENST00000545688 SNAPC2Q13487 334 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 DYRK1AQ13627 763 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 PREPLQ4J6C6 727 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-224ENST00000545688 TSHZ1Q6ZSZ6 1077 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 TTC7BQ86TV6 843 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 AOPEPQ8N6M6 819 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 TFAP2BQ92481 460 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 FBXL20Q96IG2 436 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 VKORC1Q9BQB6 163 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 HEPHQ9BQS7 1158 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 IL17RBQ9NRM6 502 aa6.23□□□□□ -1.41
SNHG1-224ENST00000545688 LRRC14BA6NHZ5 514 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 NT5C1B-RDH14C9J2C7 533 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 TOR1BO14657 336 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 MPPED1O15442 326 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 C1RP00736 705 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 RPLP2P05387 115 aaKnown RBP6.22□□□□□ -1.41
SNHG1-224ENST00000545688 MAPK10P53779 464 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 PIGFQ07326 219 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms