RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 TLE6Q9H808 572 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 KIAA1586Q9HCI6 787 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 TBC1D22BQ9NU19 505 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 LNPEPQ9UIQ6 1025 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 FEM1BQ9UK73 627 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 UBIAD1Q9Y5Z9 338 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 ASTN2O75129 1339 aaPredicted RBP9.27□□□□□ -0.93
TDP1-204ENST00000545686 KDM4FA0A1W2PPD8 638 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 A6NHS1 94 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 ZBED4O75132 1171 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 RXRBP28702 533 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 ABCD1P33897 745 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 JAK3P52333 1124 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 RNASELQ05823 741 aaKnown RBP9.27□□□□□ -0.93
TDP1-204ENST00000545686 MCL1Q07820 350 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 DNAJC3Q13217 504 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 LLGL1Q15334 1064 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 TKFCQ3LXA3 575 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 EAPPQ56P03 285 aaPredicted RBP9.27□□□□□ -0.93
TDP1-204ENST00000545686 SLC45A4Q5BKX6 768 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 ZC3H12AQ5D1E8 599 aaKnown RBP9.27□□□□□ -0.93
TDP1-204ENST00000545686 PCNX4Q63HM2 1172 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 CC2D2BQ6DHV5 1058 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 C15orf39Q6ZRI6 1047 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 SEPT14Q6ZU15 432 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 SAAL1Q96ER3 474 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 RBM41Q96IZ5 413 aaKnown RBP9.27□□□□□ -0.93
TDP1-204ENST00000545686 PWWP2AQ96N64 755 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 DBNDD1Q9H9R9 158 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 SAYSD1Q9NPB0 183 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 SHOC2Q9UQ13 582 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 C2CD2LO14523 706 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 LIASO43766 372 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 ZWINTO95229 277 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 TPBGLP0DKB5 382 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 GARTP22102 1010 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 SFNP31947 248 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 PTPN7P35236 360 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 PSMC5P62195 406 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 SATB1Q01826 763 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 FYB2Q5VWT5 728 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 PLEKHA7Q6IQ23 1121 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 CYP4F22Q6NT55 531 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 GSTA5Q7RTV2 222 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 PHF13Q86YI8 300 aaPredicted RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.26□□□□□ -0.93
TDP1-204ENST00000545686 GPD1LQ8N335 351 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 FAM13CQ8NE31 585 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 ARMC2Q8NEN0 867 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 NTPCRQ9BSD7 190 aaKnown RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 KIAA1683Q9H0B3 1180 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.26□□□□□ -0.93
TDP1-204ENST00000545686 CYLDQ9NQC7 956 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.26□□□□□ -0.932e-9■■■■■ 223.6
TDP1-204ENST00000545686 PSMC3IPQ9P2W1 217 aaPredicted RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 ZBTB21Q9ULJ3 1066 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 DRG1Q9Y295 367 aaKnown RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 PARP14Q460N5 1801 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 ATP2A1O14983 1001 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 TYROBPO43914 113 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 ECM2O94769 699 aaPredicted RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 ICAM1P05362 532 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 KRT15P19012 456 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 ATP6V1C1P21283 382 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 TARSP26639 723 aaKnown RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 NPTX2P47972 431 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 TAS2R40P59535 323 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 CLDN10P78369 228 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 MRPS35P82673 323 aaKnown RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 C1QBPQ07021 282 aaKnown RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 FAM102BQ5T8I3 360 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 LMNTD2Q8IXW0 634 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 RCOR2Q8IZ40 523 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 ALLCQ8N6M5 410 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 RDM1Q8NG50 284 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 ACER1Q8TDN7 264 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 ASAP3Q8TDY4 903 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 MICAL1Q8TDZ2 1067 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 SLC7A6OSQ96CW6 309 aaPredicted RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 PAIP2Q9BPZ3 127 aaKnown RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 TBC1D10AQ9BXI6 508 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 HEMGNQ9BXL5 484 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 TOPORSQ9NS56 1045 aaPredicted RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 MAP3K20Q9NYL2 800 aaKnown RBP9.26□□□□□ -0.93
TDP1-204ENST00000545686 ZFATQ9P243 1243 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 HAO1Q9UJM8 370 aa9.26□□□□□ -0.93
TDP1-204ENST00000545686 DENND3A2RUS2 1198 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 ALOX15BO15296 676 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 ECE2O60344 883 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 SPAG7O75391 227 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 TJP3O95049 919 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 T-ENOLP0DO92 83 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 ACADSP16219 412 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 CA4P22748 312 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 HMGB2P26583 209 aaKnown RBP9.25□□□□□ -0.93
TDP1-204ENST00000545686 PTPN4P29074 926 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 GCKP35557 465 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 ABL2P42684 1182 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 NOMO3P69849 1222 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 NFX1Q12986 1120 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms