RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CYP26A1O43174 497 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 SUPT3HO75486 399 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 ZSCAN5DPP0CG00 497 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 GCAP28676 217 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 R3HDM1Q15032 1099 aaKnown RBP13.38□□□□□ -0.27
SMG8-202ENST00000543872 ZNF804AQ7Z570 1209 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 GRK7Q8WTQ7 553 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 CELF1Q92879 486 aaKnown RBP13.38□□□□□ -0.27
SMG8-202ENST00000543872 CLMNQ96JQ2 1002 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 HAPLN3Q96S86 360 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 DCLK3Q9C098 648 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 PCIF1Q9H4Z3 704 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 SPATA7Q9P0W8 599 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 FCHO1O14526 889 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 BANF1O75531 89 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 CAV1Q03135 178 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 MED21Q13503 144 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 CCDC174Q6PII3 467 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 CEP70Q8NHQ1 597 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 CCDC110Q8TBZ0 833 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 C17orf50Q8WW18 174 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 NCSTNQ92542 709 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 PPP2R3CQ969Q6 453 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 IWS1Q96ST2 819 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 TUBB6Q9BUF5 446 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 TSSK1BQ9BXA7 367 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 SLC17A7Q9P2U7 560 aa13.38□□□□□ -0.27
SMG8-202ENST00000543872 FRMPD4Q14CM0 1322 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 PRPF4O43172 522 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMG8-202ENST00000543872 SORBS3O60504 671 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 CALCAP01258 141 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 GYS1P13807 737 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 GRIA2P42262 883 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 AP2B1P63010 937 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 KIF22Q14807 665 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 SH2D4BQ5SQS7 431 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 RAPH1Q70E73 1250 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 TXNRD3Q86VQ6 643 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 ZBED8Q8IZ13 594 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 CCDC24Q8N4L8 307 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 C12orf50Q8NA57 414 aaPredicted RBP13.37□□□□□ -0.27
SMG8-202ENST00000543872 TCP10LQ8TDR4 215 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 SLC35B4Q969S0 331 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 MANSC1Q9H8J5 431 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 CYLDQ9NQC7 956 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 ANAPC7Q9UJX3 599 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 NEU2Q9Y3R4 380 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 CACNA1SQ13698 1873 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 TMCC1O94876 653 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 MYL2P10916 166 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 RALAP11233 206 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 GCLMP48507 274 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 GALK1P51570 392 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 HYIQ5T013 277 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 LPCAT4Q643R3 524 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 ALYREFQ86V81 257 aaKnown RBP13.37□□□□□ -0.27
SMG8-202ENST00000543872 SCUBE1Q8IWY4 988 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 JDP2Q8WYK2 163 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 TTC17Q96AE7 1141 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 OSBPL8Q9BZF1 889 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 HSFX1Q9UBD0 423 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 PPARGC1AQ9UBK2 798 aaKnown RBP13.37□□□□□ -0.27
SMG8-202ENST00000543872 ARHGAP42A6NI28 874 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 ARL4CP56559 192 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 KAZNQ674X7 775 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 FBXO33Q7Z6M2 555 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 CCDC89Q8N998 374 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMG8-202ENST00000543872 PYDC1Q8WXC3 89 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 MKL1Q969V6 931 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 PHF12Q96QT6 1004 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 NMUR2Q9GZQ4 415 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 RIOX1Q9H6W3 641 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 EURLQ9NYK6 297 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 ZNF711Q9Y462 761 aa13.37□□□□□ -0.27
SMG8-202ENST00000543872 MAPK4P31152 587 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 DLG4P78352 724 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 RASA2Q15283 850 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 EPC2Q52LR7 807 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 RGS9BPQ6ZS82 235 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 TMEM110Q86TL2 294 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 NOP9Q86U38 636 aaKnown RBP13.36□□□□□ -0.27
SMG8-202ENST00000543872 PPM1KQ8N3J5 372 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 MTBPQ96DY7 904 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 SMYD3Q9H7B4 428 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 DDX43Q9NXZ2 648 aaKnown RBP13.36□□□□□ -0.27
SMG8-202ENST00000543872 SUN2Q9UH99 717 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 USTQ9Y2C2 406 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 FAM237BA0A1B0GVD1 139 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 TMEM221A6NGB7 291 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 MAGEB3O15480 346 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 LDHBP07195 334 aaKnown RBP13.36□□□□□ -0.27
SMG8-202ENST00000543872 BMP3P12645 472 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 ETS1P14921 441 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 ATF3P18847 181 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 HADHBP55084 474 aaKnown RBP13.36□□□□□ -0.27
SMG8-202ENST00000543872 PDIA2Q13087 525 aaKnown RBP13.36□□□□□ -0.27
SMG8-202ENST00000543872 EFTUD2Q15029 972 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMG8-202ENST00000543872 KBTBD12Q3ZCT8 623 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 SLC47A2Q86VL8 602 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms