RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CAND2O75155 1236 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 RTN2O75298 545 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 HOXC6P09630 235 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 MX2P20592 715 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 CCDC15Q0P6D6 951 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 KCTD16Q68DU8 428 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 ZCCHC8Q6NZY4 707 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 TAS2R42Q7RTR8 314 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 PTF1AQ7RTS3 328 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 CHSY1Q86X52 802 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 SRRM1Q8IYB3 904 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 CHPFQ8IZ52 775 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 ARHGAP18Q8N392 663 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 UBR7Q8N806 425 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 ASAP3Q8TDY4 903 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 SPACA7Q96KW9 195 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC7A5P2Q9GIP4 190 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 WNT8AQ9H1J5 351 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 TTC7AQ9ULT0 858 aaPredicted RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 DOLKQ9UPQ8 538 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 PCDHB2Q9Y5E7 798 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 APOL1O14791 398 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 IRF6O14896 467 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 EVI5O60447 810 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 THP07101 528 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 CASP7P55210 303 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 TBX4P57082 545 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 PDXDC1Q6P996 788 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 ATP8B4Q8TF62 1192 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 PABPC5Q96DU9 382 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 TRIM54Q9BYV2 358 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 OSBPL2Q9H1P3 480 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 DPP3Q9NY33 737 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 FZD1Q9UP38 647 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 MYPNQ86TC9 1320 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 PPLO60437 1756 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 UBA6A0AVT1 1052 aaPredicted RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 TEX33O43247 280 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 ACSL3O95573 720 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 CKMP06732 381 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 FDPSP14324 419 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 INSRRP14616 1297 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 TM4SF1P30408 202 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 YWHAHQ04917 246 aaPredicted RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 ANO4Q32M45 955 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 MPZL3Q6UWV2 235 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 USP49Q70CQ1 688 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 SIX5Q8N196 739 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 ULK4Q96C45 1275 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 DCUN1D1Q96GG9 259 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 RIOX1Q9H6W3 641 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 HACD3Q9P035 362 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 HPS5Q9UPZ3 1129 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 F5H423 210 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 TIMM44O43615 452 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 ALDH5A1P51649 535 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 VAC14Q08AM6 782 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 WASHC5Q12768 1159 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 DPYDQ12882 1025 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 CUL1Q13616 776 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 ACVR2BQ13705 512 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 BTG3Q14201 252 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 FSCN1Q16658 493 aaKnown RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 EFHC1Q5JVL4 640 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 THEMIS2Q5TEJ8 643 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 TTC19Q6DKK2 380 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 ZC3H18Q86VM9 953 aaKnown RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 TTC8Q8TAM2 541 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 SDCCAG3Q96C92 435 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 FGD4Q96M96 766 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 SYNDIG1Q9H7V2 258 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 GPRC5CQ9NQ84 441 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 NDFIP2Q9NV92 336 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 SNX24Q9Y343 169 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 KIF1AQ12756 1690 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 ANO9A1A5B4 782 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 FKTNO75072 461 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 UCHL3P15374 230 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 NR1H3Q13133 447 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 PGM5Q15124 567 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 LY6KQ17RY6 165 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 DCAF6Q58WW2 860 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 MMS22LQ6ZRQ5 1243 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 RAB42Q8N4Z0 105 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 ATPAF2Q8N5M1 289 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC7A14Q8TBB6 771 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 MRIQ9BWK5 157 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 TSPYL2Q9H2G4 693 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 A0A087WZ62 844 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 P4HA2O15460 535 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 ALDH2P05091 517 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC1A1P43005 524 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 CCT5P48643 541 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 IRX4P78413 519 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 TMED1Q13445 227 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 GTF2H3Q13889 308 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 GRIK4Q16099 956 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 CTXN3Q4LDR2 81 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 TRIM59Q8IWR1 403 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 FDXACB1Q9BRP7 624 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms