RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 KRT19P08727 400 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 NOP2P46087 812 aaKnown RBP9.97□□□□□ -0.81
GNE-206ENST00000543356 ACLYP53396 1101 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 RBP5P82980 135 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 PTGISQ16647 500 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 XKR4Q5GH76 650 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 ZNF667Q5HYK9 610 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 PPP1R2P3Q6NXS1 205 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 TMEM270Q6UE05 265 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 DNAAF5Q86Y56 855 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 RHOT2Q8IXI1 618 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 LRRC57Q8N9N7 239 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 TPCN2Q8NHX9 752 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 WNT8BQ93098 351 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 KIF12Q96FN5 646 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 NXF3Q9H4D5 531 aaKnown RBP9.97□□□□□ -0.81
GNE-206ENST00000543356 CISHQ9NSE2 258 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 DPP3Q9NY33 737 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 EFCAB8A8MWE9 144 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 RECQL4O94761 1208 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 P4HA1P13674 534 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 GNA15P30679 374 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 PTK7Q13308 1070 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 ZBTB6Q15916 424 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 MEI1Q5TIA1 1274 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 ACAD10Q6JQN1 1059 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 SLFN11Q7Z7L1 901 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 SYCE1Q8N0S2 351 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 ARHGEF26Q96DR7 871 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 THAP2Q9H0W7 228 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 HMX1Q9NP08 348 aaPredicted RBP9.97□□□□□ -0.81
GNE-206ENST00000543356 CHST12Q9NRB3 414 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 CALCOCO1Q9P1Z2 691 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 HYOU1Q9Y4L1 999 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 CAND2O75155 1236 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 MTA2O94776 668 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 CHRNA1P02708 482 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 CYP1A1P04798 512 aaPredicted RBP9.96□□□□□ -0.81
GNE-206ENST00000543356 UNGP13051 313 aaPredicted RBP9.96□□□□□ -0.81
GNE-206ENST00000543356 TCP1P17987 556 aaKnown RBP9.96□□□□□ -0.81
GNE-206ENST00000543356 ABCB4P21439 1286 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 POLR2BP30876 1174 aaKnown RBP9.96□□□□□ -0.81
GNE-206ENST00000543356 GRK4P32298 578 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 GPC5P78333 572 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 HTRA3P83110 453 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 ITGA7Q13683 1181 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 LHX8Q68G74 356 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 LRRN4CLQ8ND94 238 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 TLR10Q9BXR5 811 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 TSPYL1Q9H0U9 437 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 CYP3A43Q9HB55 503 aa9.96□□□□□ -0.81
GNE-206ENST00000543356 RPS6KA5O75582 802 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 KCNE1P15382 129 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 CENPCQ03188 943 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 CKAP4Q07065 602 aaKnown RBP9.96□□□□□ -0.82
GNE-206ENST00000543356 FAM26DQ5JW98 314 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 TTC39CQ8N584 583 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 SMG8Q8ND04 991 aaKnown RBP9.96□□□□□ -0.82
GNE-206ENST00000543356 BEST2Q8NFU1 509 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 SLC35G2Q8TBE7 412 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 TRIM11Q96F44 468 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 HPDLQ96IR7 371 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 ZMAT2Q96NC0 199 aaKnown RBP9.96□□□□□ -0.82
GNE-206ENST00000543356 GTF3C4Q9UKN8 822 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 POLIQ9UNA4 740 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 AGAP1Q9UPQ3 857 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 IPPQ9Y573 584 aa9.96□□□□□ -0.82
GNE-206ENST00000543356 CYP1A2P05177 515 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 MYBL1P10243 752 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 TUBB4BP68371 445 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 TRIM71Q2Q1W2 868 aaKnown RBP9.95□□□□□ -0.82
GNE-206ENST00000543356 WDR72Q3MJ13 1102 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 SCARA5Q6ZMJ2 495 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 EGFL6Q8IUX8 553 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 LRRC52Q8N7C0 313 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 GLT1D1Q96MS3 346 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 OSBPL9Q96SU4 736 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 NXF1Q9UBU9 619 aaKnown RBP9.95□□□□□ -0.82
GNE-206ENST00000543356 RSPH14Q9UHP6 348 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 UBQLN1Q9UMX0 589 aaKnown RBP9.95□□□□□ -0.82
GNE-206ENST00000543356 ST3GAL5Q9UNP4 418 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 HES2Q9Y543 173 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 CES2O00748 559 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 GPR182O15218 404 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 THAP12O43422 761 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 XPOTO43592 962 aaKnown RBP9.95□□□□□ -0.82
GNE-206ENST00000543356 NCK2O43639 380 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 LSM8O95777 96 aaKnown RBP9.95□□□□□ -0.82
GNE-206ENST00000543356 FTCDO95954 541 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 CALCAP01258 141 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 PAEPP09466 180 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 CTSHP09668 335 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 CD58P19256 250 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 THPOP40225 353 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 GUCY2FP51841 1108 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 MYO1EQ12965 1108 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 TWF2Q6IBS0 349 aaKnown RBP9.95□□□□□ -0.82
GNE-206ENST00000543356 C11orf63Q6NUN7 778 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 RSRC2Q7L4I2 434 aaKnown RBP9.95□□□□□ -0.82
GNE-206ENST00000543356 ZNF572Q7Z3I7 529 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms