RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	PHKA2	P46019	1235 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	GABPB1	Q06547	395 aa	Predicted RBP	7.1	□□□□□ -1.27
CIT-213	ENST00000543324	PTGDR	Q13258	359 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	EPHA7	Q15375	998 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	MTERF2	Q49AM1	385 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	PKDCC	Q504Y2	493 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	PLA2G4F	Q68DD2	849 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	PIK3AP1	Q6ZUJ8	805 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	TMPRSS7	Q7RTY8	843 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	TICAM1	Q8IUC6	712 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	CREBRF	Q8IUR6	639 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	SLFN12	Q8IYM2	578 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	VPS52	Q8N1B4	723 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	LRRC43	Q8N309	656 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	NECAB1	Q8N987	351 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	SMG7	Q92540	1137 aa	Known RBP	7.1	□□□□□ -1.27
CIT-213	ENST00000543324	WASF1	Q92558	559 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	ZNF707	Q96C28	371 aa	Predicted RBP	7.1	□□□□□ -1.27
CIT-213	ENST00000543324	HSD17B14	Q9BPX1	270 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	LXN	Q9BS40	222 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	MINDY3	Q9H8M7	445 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	ATP6V0A4	Q9HBG4	840 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	XPNPEP1	Q9NQW7	623 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	MAN1C1	Q9NR34	630 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	CHST12	Q9NRB3	414 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	PLSCR2	Q9NRY7	297 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	AGPAT5	Q9NUQ2	364 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	GINS2	Q9Y248	185 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	ANK1	P16157	1881 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324		A0A087WZ62	844 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	MEIS3P2	A8K0S8	358 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	BTBD18	B2RXH4	712 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	TLX3	O43711	291 aa	Predicted RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	B4GALT3	O60512	393 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	CCNT1	O60563	726 aa	Known RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	CSDE1	O75534	798 aa	Known RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	SLITRK3	O94933	977 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	C8A	P07357	584 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	XBP1	P17861	261 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	FGFR4	P22455	802 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	SFPQ	P23246	707 aa	Known RBP eCLIP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	GRN	P28799	593 aa	Known RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	HOXA11	P31270	313 aa	Predicted RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	RFC5	P40937	340 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	NPEPPS	P55786	919 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	CXADR	P78310	365 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	POU5F1B	Q06416	359 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	LMAN2	Q12907	356 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	ELF2	Q15723	593 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	AMHR2	Q16671	573 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	UBXN11	Q5T124	520 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	TOGARAM2	Q6ZUX3	1019 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	TRMT1L	Q7Z2T5	733 aa	Known RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	MRPL10	Q7Z7H8	261 aa	Known RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	DIS3L2	Q8IYB7	885 aa	Known RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	PDCL2	Q8N4E4	241 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	DNASE1L2	Q92874	299 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	ZNF668	Q96K58	619 aa	Predicted RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	KXD1	Q9BQD3	176 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	JPH2	Q9BR39	696 aa	Predicted RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	SH2D3A	Q9BRG2	576 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	FDXACB1	Q9BRP7	624 aa	Predicted RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	NFKBIZ	Q9BYH8	718 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	GCOM2	Q9BZD3	368 aa	Predicted RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	POLM	Q9NP87	494 aa	Predicted RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	DACT1	Q9NYF0	836 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	RGL1	Q9NZL6	768 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	USP25	Q9UHP3	1055 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	COL4A3BP	Q9Y5P4	624 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	HEMK1	Q9Y5R4	338 aa	Predicted RBP	7.09	□□□□□ -1.27
CIT-213	ENST00000543324	DOCK6	Q96HP0	2047 aa		7.09	□□□□□ -1.27
CIT-213	ENST00000543324	ZBTB39	O15060	712 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	RRP8	O43159	456 aa	Known RBP	7.08	□□□□□ -1.28
CIT-213	ENST00000543324	DKC1	O60832	514 aa	Known RBP eCLIP	7.08	□□□□□ -1.28
CIT-213	ENST00000543324	RFPL2	O75678	378 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	ZMYND10	O75800	440 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	RHOBTB1	O94844	696 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	PTMA	P06454	111 aa	Known RBP	7.08	□□□□□ -1.28
CIT-213	ENST00000543324	SPATA31C1	P0DKV0	1188 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	IBSP	P21815	317 aa	Predicted RBP	7.08	□□□□□ -1.28
CIT-213	ENST00000543324	YWHAB	P31946	246 aa	Known RBP	7.08	□□□□□ -1.28
CIT-213	ENST00000543324	MAPK8	P45983	427 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	DNM2	P50570	870 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	RAB27A	P51159	221 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	NEK4	P51957	841 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	POLG	P54098	1239 aa	Predicted RBP	7.08	□□□□□ -1.28
CIT-213	ENST00000543324	LAMTOR4	Q0VGL1	99 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	ORC2	Q13416	577 aa	Predicted RBP	7.08	□□□□□ -1.28
CIT-213	ENST00000543324	EMC2	Q15006	297 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	PCBP1	Q15365	356 aa	Known RBP eCLIP	7.08	□□□□□ -1.28
CIT-213	ENST00000543324	TRIP6	Q15654	476 aa	Known RBP	7.08	□□□□□ -1.28
CIT-213	ENST00000543324	AGMO	Q6ZNB7	445 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324		Q6ZS52	159 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	SRGAP1	Q7Z6B7	1085 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	FERMT3	Q86UX7	667 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	TMEM173	Q86WV6	379 aa	Predicted RBP	7.08	□□□□□ -1.28
CIT-213	ENST00000543324	RHPN2	Q8IUC4	686 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	KSR1	Q8IVT5	923 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	EXOC8	Q8IYI6	725 aa		7.08	□□□□□ -1.28
CIT-213	ENST00000543324	RNF168	Q8IYW5	571 aa	Predicted RBP	7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms