RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 GZF1Q9H116 711 aaPredicted RBP19.85■□□□□ 0.77
COPS7A-216ENST00000543170 NUP62CLQ9H1M0 184 aa19.85■□□□□ 0.77
COPS7A-216ENST00000543170 DPP7Q9UHL4 492 aa19.85■□□□□ 0.77
COPS7A-216ENST00000543170 BARX2Q9UMQ3 279 aaPredicted RBP19.85■□□□□ 0.77
COPS7A-216ENST00000543170 H7C4K7 107 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 GLUD1P00367 558 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 DLATP10515 647 aaKnown RBP19.84■□□□□ 0.77
COPS7A-216ENST00000543170 ODC1P11926 461 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 TNNI1P19237 187 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 CCNE1P24864 410 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 POLR2BP30876 1174 aaKnown RBP19.84■□□□□ 0.77
COPS7A-216ENST00000543170 CASP4P49662 377 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 TFF2Q03403 129 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 ADAM9Q13443 819 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 CAMK4Q16566 473 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 CEP135Q66GS9 1140 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 LMBRD2Q68DH5 695 aaPredicted RBP19.84■□□□□ 0.77
COPS7A-216ENST00000543170 ANKRD54Q6NXT1 300 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 DSTYKQ6XUX3 929 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 EP400NLQ6ZTU2 488 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 USP37Q86T82 979 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 SMRP1Q8NCR6 262 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 OR5B17Q8NGF7 314 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 TMC2Q8TDI7 906 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 HDAC7Q8WUI4 952 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 ASB2Q96Q27 587 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 CLSTN3Q9BQT9 956 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 OXCT2Q9BYC2 517 aaPredicted RBP19.84■□□□□ 0.77
COPS7A-216ENST00000543170 SIX4Q9UIU6 781 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 CD207Q9UJ71 328 aa19.84■□□□□ 0.77
COPS7A-216ENST00000543170 H3BQ06 376 aaPredicted RBP19.83■□□□□ 0.77
COPS7A-216ENST00000543170 SPTLC1O15269 473 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 TBC1D4O60343 1298 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 AKAP3O75969 853 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 CYP11A1P05108 521 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 EPCAMP16422 314 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 MCCD1P59942 119 aaPredicted RBP19.83■□□□□ 0.77
COPS7A-216ENST00000543170 RBP5P82980 135 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 RBM10P98175 930 aaKnown RBP19.83■□□□□ 0.77
COPS7A-216ENST00000543170 YWHAHQ04917 246 aaPredicted RBP19.83■□□□□ 0.77
COPS7A-216ENST00000543170 SMAD4Q13485 552 aaKnown RBP19.83■□□□□ 0.77
COPS7A-216ENST00000543170 SLC8B1Q6J4K2 584 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 ZNF280DQ6N043 979 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 LLGL2Q6P1M3 1020 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 ELMSAN1Q6PJG2 1045 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 INTS8Q75QN2 995 aaKnown RBP19.83■□□□□ 0.77
COPS7A-216ENST00000543170 PLEKHO2Q8TD55 490 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 CCDC127Q96BQ5 260 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 SENP8Q96LD8 212 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 DSEQ9UL01 958 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 AGAP1Q9UPQ3 857 aa19.83■□□□□ 0.77
COPS7A-216ENST00000543170 LRRIQ3A6PVS8 624 aaPredicted RBP19.82■□□□□ 0.76
COPS7A-216ENST00000543170 KPNA7A9QM74 516 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 PPP1R3GB7ZBB8 358 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 BIN1O00499 593 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 CETN3O15182 167 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 SLC16A3O15427 465 aaKnown RBP19.82■□□□□ 0.76
COPS7A-216ENST00000543170 OAZ2O95190 189 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 MBD3O95983 291 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 CD44P16070 742 aaKnown RBP19.82■□□□□ 0.76
COPS7A-216ENST00000543170 RPL17P18621 184 aaKnown RBP19.82■□□□□ 0.76
COPS7A-216ENST00000543170 PSMC2P35998 433 aaKnown RBP19.82■□□□□ 0.76
COPS7A-216ENST00000543170 FKBP3Q00688 224 aaKnown RBP19.82■□□□□ 0.76
COPS7A-216ENST00000543170 RAB33AQ14088 237 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 TJAP1Q5JTD0 557 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 ISM2Q6H9L7 571 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 LILRA6Q6PI73 481 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 TRAPPC11Q7Z392 1133 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 FAM186BQ8IYM0 893 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 CSGALNACT2Q8N6G5 542 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.82■□□□□ 0.76
COPS7A-216ENST00000543170 GPT2Q8TD30 523 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 BORCS6Q96GS4 357 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 PLEKHA4Q9H4M7 779 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 FAM50BQ9Y247 325 aa19.82■□□□□ 0.76
COPS7A-216ENST00000543170 BICDL2A1A5D9 508 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 IKBKBO14920 756 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 TGM5O43548 720 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 PAPLNO95428 1278 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 KRT19P08727 400 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 PMS1P54277 932 aaKnown RBP19.81■□□□□ 0.76
COPS7A-216ENST00000543170 BFSP1Q12934 665 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 ANKRD40Q6AI12 368 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 SYCE2Q6PIF2 218 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 SPATA18Q8TC71 538 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 FAM84AQ96KN4 292 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 POP1Q99575 1024 aaKnown RBP19.81■□□□□ 0.76
COPS7A-216ENST00000543170 SFXN1Q9H9B4 322 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 GDAP2Q9NXN4 497 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 FBXW11Q9UKB1 542 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 R3HCC1Q9Y3T6 440 aaKnown RBP19.81■□□□□ 0.76
COPS7A-216ENST00000543170 CDY1Q9Y6F8 540 aa19.81■□□□□ 0.76
COPS7A-216ENST00000543170 TRIM49BA6NDI0 452 aa19.8■□□□□ 0.76
COPS7A-216ENST00000543170 TULP1O00294 542 aaPredicted RBP19.8■□□□□ 0.76
COPS7A-216ENST00000543170 STAU1O95793 577 aaKnown RBP19.8■□□□□ 0.76
COPS7A-216ENST00000543170 EPB41P11171 864 aaKnown RBP19.8■□□□□ 0.76
COPS7A-216ENST00000543170 KRT13P13646 458 aa19.8■□□□□ 0.76
COPS7A-216ENST00000543170 VAMP7P51809 220 aa19.8■□□□□ 0.76
COPS7A-216ENST00000543170 ITIH3Q06033 890 aa19.8■□□□□ 0.76
COPS7A-216ENST00000543170 MYO1EQ12965 1108 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms