RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 CSPG5O95196 566 aa22.38■■□□□ 1.17
OTUB1-211ENST00000543004 SERPINC1P01008 464 aa22.38■■□□□ 1.17
OTUB1-211ENST00000543004 LRMPQ12912 555 aa22.38■■□□□ 1.17
OTUB1-211ENST00000543004 LRRC52Q8N7C0 313 aa22.38■■□□□ 1.17
OTUB1-211ENST00000543004 APOBEC3GQ9HC16 384 aaKnown RBP22.38■■□□□ 1.17
OTUB1-211ENST00000543004 POLIQ9UNA4 740 aa22.38■■□□□ 1.17
OTUB1-211ENST00000543004 R3HCC1Q9Y3T6 440 aaKnown RBP22.38■■□□□ 1.17
OTUB1-211ENST00000543004 TSC2P49815 1807 aa22.38■■□□□ 1.17
OTUB1-211ENST00000543004 COL4A4P53420 1690 aaPredicted RBP22.37■■□□□ 1.17
OTUB1-211ENST00000543004 KPNA7A9QM74 516 aa22.37■■□□□ 1.17
OTUB1-211ENST00000543004 ASS1P00966 412 aaKnown RBP22.37■■□□□ 1.17
OTUB1-211ENST00000543004 SLC9A1P19634 815 aa22.37■■□□□ 1.17
OTUB1-211ENST00000543004 ZNF699Q32M78 642 aa22.37■■□□□ 1.17
OTUB1-211ENST00000543004 FUT10Q6P4F1 479 aa22.37■■□□□ 1.17
OTUB1-211ENST00000543004 TMEM169Q96HH4 297 aa22.37■■□□□ 1.17
OTUB1-211ENST00000543004 GCNT4Q9P109 453 aa22.37■■□□□ 1.17
OTUB1-211ENST00000543004 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.37■■□□□ 1.17
OTUB1-211ENST00000543004 ATG2AQ2TAZ0 1938 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 LGALS16A8MUM7 142 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 C5orf67F2Z3F1 127 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 RFXAPO00287 272 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 PMM2O15305 246 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 N4BP1O75113 896 aaKnown RBP22.36■■□□□ 1.17
OTUB1-211ENST00000543004 EFEMP2O95967 443 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 DNAJB1P25685 340 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 AARSP49588 968 aaKnown RBP eCLIP22.36■■□□□ 1.17
OTUB1-211ENST00000543004 KLK7P49862 253 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 KCNMA1Q12791 1236 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 WDR72Q3MJ13 1102 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 TATDN2Q93075 761 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 ZNF560Q96MR9 790 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 RTN4Q9NQC3 1192 aaKnown RBP22.36■■□□□ 1.17
OTUB1-211ENST00000543004 NXF1Q9UBU9 619 aaKnown RBP22.36■■□□□ 1.17
OTUB1-211ENST00000543004 RWDD3Q9Y3V2 267 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 TIMM13Q9Y5L4 95 aaPredicted RBP22.36■■□□□ 1.17
OTUB1-211ENST00000543004 SNX9Q9Y5X1 595 aa22.36■■□□□ 1.17
OTUB1-211ENST00000543004 P4HA2O15460 535 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 MYO1EQ12965 1108 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 SGSM1Q2NKQ1 1148 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 SV2CQ496J9 727 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 DSTYKQ6XUX3 929 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 EHBP1Q8NDI1 1231 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 FBXO22Q8NEZ5 403 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 SENP8Q96LD8 212 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 INTS2Q9H0H0 1204 aaKnown RBP22.35■■□□□ 1.17
OTUB1-211ENST00000543004 IFNKQ9P0W0 207 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 A0A1B0GTH6 734 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 GRM6O15303 877 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 TPM2P07951 284 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 TKTP29401 623 aaKnown RBP22.35■■□□□ 1.17
OTUB1-211ENST00000543004 ATICP31939 592 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 PPM1AP35813 382 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 PNPLA4P41247 253 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 NOP14P78316 857 aaKnown RBP22.35■■□□□ 1.17
OTUB1-211ENST00000543004 PLCB2Q00722 1185 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 PLCB3Q01970 1234 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 UBXN1Q04323 297 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 FAM171A1Q5VUB5 890 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 SCARA5Q6ZMJ2 495 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 RNF168Q8IYW5 571 aaPredicted RBP22.35■■□□□ 1.17
OTUB1-211ENST00000543004 SUSD3Q96L08 255 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 PLVAPQ9BX97 442 aa22.35■■□□□ 1.17
OTUB1-211ENST00000543004 TTYH1Q9H313 450 aaPredicted RBP22.35■■□□□ 1.17
OTUB1-211ENST00000543004 REV3LO60673 3130 aa22.34■■□□□ 1.17
OTUB1-211ENST00000543004 SF3B1O75533 1304 aaKnown RBP eCLIP22.34■■□□□ 1.17
OTUB1-211ENST00000543004 CYB561D2O14569 222 aa22.34■■□□□ 1.17
OTUB1-211ENST00000543004 PON1P27169 355 aa22.34■■□□□ 1.17
OTUB1-211ENST00000543004 EXOC3L4Q17RC7 722 aa22.34■■□□□ 1.17
OTUB1-211ENST00000543004 GBP6Q6ZN66 633 aa22.34■■□□□ 1.17
OTUB1-211ENST00000543004 CEP57Q86XR8 500 aa22.34■■□□□ 1.17
OTUB1-211ENST00000543004 SPPL3Q8TCT6 385 aa22.34■■□□□ 1.17
OTUB1-211ENST00000543004 GDPD5Q8WTR4 605 aa22.34■■□□□ 1.17
OTUB1-211ENST00000543004 SAMD11Q96NU1 681 aa22.34■■□□□ 1.17
OTUB1-211ENST00000543004 ZNF576Q9H609 170 aa22.34■■□□□ 1.17
OTUB1-211ENST00000543004 MYO7AQ13402 2215 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 M0QZQ0 153 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 STAU1O95793 577 aaKnown RBP22.33■■□□□ 1.17
OTUB1-211ENST00000543004 RAP1GAPP47736 663 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 UBASH3AP57075 661 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 CETN1Q12798 172 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 GPM6BQ13491 265 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 NR1I3Q14994 352 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 ZNF667Q5HYK9 610 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 RTP2Q5QGT7 225 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 DPY19L2P1Q6NXN4 242 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 GJB7Q6PEY0 223 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 TRIM65Q6PJ69 517 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 DDX53Q86TM3 631 aaKnown RBP22.33■■□□□ 1.17
OTUB1-211ENST00000543004 ARHGEF19Q8IW93 802 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 POF1BQ8WVV4 589 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 AUTS2Q8WXX7 1259 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 ARID3AQ99856 593 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 SDCBP2Q9H190 292 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 SMYD3Q9H7B4 428 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 VRTNQ9H8Y1 702 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 GDAP2Q9NXN4 497 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 L1RE1Q9UN81 338 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 PCDHGC5Q9Y5F6 944 aa22.33■■□□□ 1.17
OTUB1-211ENST00000543004 GTPBP10A4D1E9 387 aaKnown RBP22.32■■□□□ 1.16
OTUB1-211ENST00000543004 H3BNC9 293 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms