RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 CDK5RAP3Q96JB5 506 aa12.92□□□□□ -0.34
PTPN6-219ENST00000542848 HINFPQ9BQA5 517 aa12.92□□□□□ -0.34
PTPN6-219ENST00000542848 TRMT61BQ9BVS5 477 aaKnown RBP12.92□□□□□ -0.34
PTPN6-219ENST00000542848 GPR88Q9GZN0 384 aa12.92□□□□□ -0.34
PTPN6-219ENST00000542848 BRD9Q9H8M2 597 aa12.92□□□□□ -0.34
PTPN6-219ENST00000542848 TRPV5Q9NQA5 729 aa12.92□□□□□ -0.34
PTPN6-219ENST00000542848 HEBP1Q9NRV9 189 aa12.92□□□□□ -0.34
PTPN6-219ENST00000542848 CEP72Q9P209 647 aa12.92□□□□□ -0.34
PTPN6-219ENST00000542848 PCDHGA2Q9Y5H1 932 aa12.92□□□□□ -0.34
PTPN6-219ENST00000542848 GPR179Q6PRD1 2367 aa12.92□□□□□ -0.34
PTPN6-219ENST00000542848 SPAG17Q6Q759 2223 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 VWA3AA6NCI4 1184 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 SHISA7A6NL88 538 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 XPOTO43592 962 aaKnown RBP12.91□□□□□ -0.34
PTPN6-219ENST00000542848 MOSPD3O75425 235 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 CXCL8P10145 99 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 CPB1P15086 417 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 PSMC3P17980 439 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 ANP32AP39687 249 aaKnown RBP12.91□□□□□ -0.34
PTPN6-219ENST00000542848 AARSP49588 968 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPN6-219ENST00000542848 YWHAHQ04917 246 aaPredicted RBP12.91□□□□□ -0.34
PTPN6-219ENST00000542848 TWF1Q12792 350 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 RABEP1Q15276 862 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 TMEM119Q4V9L6 283 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 ARSHQ5FYA8 562 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 RNF19BQ6ZMZ0 732 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 MAMSTRQ6ZN01 415 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 HAUS6Q7Z4H7 955 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 MAP4K3Q8IVH8 894 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 HS6ST3Q8IZP7 471 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 ZBTB44Q8NCP5 570 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 BEST2Q8NFU1 509 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 NELL1Q92832 810 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 SMARCD2Q92925 531 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 KIF12Q96FN5 646 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 PLIN2Q99541 437 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 FAM126AQ9BYI3 521 aaPredicted RBP12.91□□□□□ -0.34
PTPN6-219ENST00000542848 HAPLN2Q9GZV7 340 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 TRPV4Q9HBA0 871 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 ASAH2Q9NR71 780 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 ZSCAN32Q9NX65 697 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 TUBGCP4Q9UGJ1 667 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 ODF2LQ9ULJ1 636 aa12.91□□□□□ -0.34
PTPN6-219ENST00000542848 UBQLN1Q9UMX0 589 aaKnown RBP12.91□□□□□ -0.34
PTPN6-219ENST00000542848 ATG2BQ96BY7 2078 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 ADRB2P07550 413 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 PAX3P23760 479 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 MLLT6P55198 1093 aaPredicted RBP12.9□□□□□ -0.34
PTPN6-219ENST00000542848 PPP2R3AQ06190 1150 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 GPR17Q13304 367 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 PLD1Q13393 1074 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 GRM2Q14416 872 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 VITQ6UXI7 678 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 MFSD6LQ8IWD5 586 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 ZNF687Q8N1G0 1237 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 DCLK2Q8N568 766 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 DEPDC1BQ8WUY9 529 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 E2F7Q96AV8 911 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 RMDN1Q96DB5 314 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 BICD1Q96G01 975 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 AK8Q96MA6 479 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 ZSWIM3Q96MP5 696 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 ZNF334Q9HCZ1 680 aaPredicted RBP12.9□□□□□ -0.34
PTPN6-219ENST00000542848 OBSL1O75147 1896 aa12.9□□□□□ -0.34
PTPN6-219ENST00000542848 NPHP3-ACAD11A0A0J9YXS1 232 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 OR6C75A6NL08 312 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 LACTBL1A8MY62 500 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 H3BQV1 296 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 NRG2O14511 850 aaPredicted RBP12.89□□□□□ -0.35
PTPN6-219ENST00000542848 OGTO15294 1046 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 LILRB5O75023 590 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 PIGRP01833 764 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 MYL4P12829 197 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 GDI1P31150 447 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 TNFSF9P41273 254 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 LIG4P49917 911 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 EPHB3P54753 998 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 SPAG1Q07617 926 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 MYBPC2Q14324 1141 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 PUM1Q14671 1186 aaKnown RBP eCLIP12.89□□□□□ -0.35
PTPN6-219ENST00000542848 DSTYKQ6XUX3 929 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 USP37Q86T82 979 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 CD302Q8IX05 232 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 GPR161Q8N6U8 529 aaKnown RBP12.89□□□□□ -0.35
PTPN6-219ENST00000542848 ZSCAN18Q8TBC5 510 aaPredicted RBP12.89□□□□□ -0.35
PTPN6-219ENST00000542848 CALML4Q96GE6 196 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 IER2Q9BTL4 223 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 LRRC3Q9BY71 257 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 CHRDQ9H2X0 955 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 RPF1Q9H9Y2 349 aaKnown RBP12.89□□□□□ -0.35
PTPN6-219ENST00000542848 PRMT8Q9NR22 394 aaPredicted RBP12.89□□□□□ -0.35
PTPN6-219ENST00000542848 TBX20Q9UMR3 447 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 YIPF1Q9Y548 306 aa12.89□□□□□ -0.35
PTPN6-219ENST00000542848 TIMM13Q9Y5L4 95 aaPredicted RBP12.89□□□□□ -0.35
PTPN6-219ENST00000542848 ZNF263O14978 683 aa12.88□□□□□ -0.35
PTPN6-219ENST00000542848 HNRNPDLO14979 420 aaKnown RBP12.88□□□□□ -0.35
PTPN6-219ENST00000542848 FAM189A1O60320 539 aa12.88□□□□□ -0.35
PTPN6-219ENST00000542848 VNN2O95498 520 aa12.88□□□□□ -0.35
PTPN6-219ENST00000542848 TYMPP19971 482 aa12.88□□□□□ -0.35
PTPN6-219ENST00000542848 GJB2P29033 226 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms