RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 DICER1Q9UPY3 1922 aaKnown RBP6.96□□□□□ -1.29
PTPRO-208ENST00000542557 RGS16O15492 202 aaPredicted RBP6.96□□□□□ -1.3
PTPRO-208ENST00000542557 FAM189A1O60320 539 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 SORBS3O60504 671 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 LSM8O95777 96 aaKnown RBP6.96□□□□□ -1.3
PTPRO-208ENST00000542557 ASS1P00966 412 aaKnown RBP6.96□□□□□ -1.3
PTPRO-208ENST00000542557 IVDP26440 423 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 TMOD1P28289 359 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 STAT5BP51692 787 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 CNTN2Q02246 1040 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 DRP2Q13474 957 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 MAMLD1Q13495 774 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 SURF1Q15526 300 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 CCNG2Q16589 344 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 SKIDA1Q1XH10 827 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 ZBTB41Q5SVQ8 909 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 TMEM270Q6UE05 265 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 SEPT14Q6ZU15 432 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 BBOF1Q8ND07 529 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 ATL2Q8NHH9 583 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 EXD1Q8NHP7 514 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 C1orf54Q8WWF1 131 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 C11orf70Q9BRQ4 267 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 MRPL4Q9BYD3 311 aaKnown RBP6.96□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC113Q9H0I3 377 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC134Q9H6E4 229 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 CHST7Q9NS84 486 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 PARVAQ9NVD7 372 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 NEU2Q9Y3R4 380 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 ANKRD65E5RJM6 399 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 TOM1L1O75674 476 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 FSBPO95073 299 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 CALCAP01258 141 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 FGFR4P22455 802 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 MMP8P22894 467 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 FSTL1Q12841 308 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 MKRN4PQ13434 485 aaPredicted RBP6.96□□□□□ -1.3
PTPRO-208ENST00000542557 TTC31Q49AM3 519 aaPredicted RBP6.96□□□□□ -1.3
PTPRO-208ENST00000542557 IER5Q5VY09 327 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 NME8Q8N427 588 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 OR5B17Q8NGF7 314 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 TCP11Q8WWU5 503 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 SEPT1Q8WYJ6 367 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 XPO6Q96QU8 1125 aaKnown RBP6.96□□□□□ -1.3
PTPRO-208ENST00000542557 ADAM7Q9H2U9 754 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 AZI2Q9H6S1 392 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 AAASQ9NRG9 546 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 ASIC3Q9UHC3 531 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 IP6K2Q9UHH9 426 aa6.96□□□□□ -1.3
PTPRO-208ENST00000542557 SOWAHBA6NEL2 793 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 RASGRF2O14827 1237 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 THAP12O43422 761 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 MSCO60682 206 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 LGR5O75473 907 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 USP2O75604 605 aaPredicted RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 CALB1P05937 261 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 ATF2P15336 505 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 VGLL4Q14135 290 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 TREML2Q5T2D2 321 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 LRRC38Q5VT99 294 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 KCNV1Q6PIU1 500 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 TAOK1Q7L7X3 1001 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 RELL1Q8IUW5 271 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 GPC2Q8N158 579 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 OTUD6BQ8N6M0 293 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC89Q8N998 374 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 FEZF2Q8TBJ5 459 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 MICAL1Q8TDZ2 1067 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 ATXN2LQ8WWM7 1075 aaKnown RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 P3H4Q92791 437 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 HERPUD2Q9BSE4 406 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 OSBPL8Q9BZF1 889 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 ZNF518BQ9C0D4 1074 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 SPATC1LQ9H0A9 340 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 C2orf40Q9H1Z8 148 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 CDC42EP4Q9H3Q1 356 aaKnown RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 BTBD7Q9P203 1132 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 IGKV6-21A0A0C4DH24 114 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 TCRBV5S1A1TA0A578 114 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 ABLIM1O14639 778 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 IRF6O14896 467 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 OGTO15294 1046 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 TCEA3O75764 348 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 CFHP08603 1231 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 RALAP11233 206 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 ATP5DP30049 168 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 CDH5P33151 784 aaPredicted RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 PTPN7P35236 360 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 TCF7P36402 384 aaPredicted RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 CETN2P41208 172 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 TAS2R40P59535 323 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 TAP1Q03518 808 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 MCL1Q07820 350 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 AUHQ13825 339 aaKnown RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 MXD4Q14582 209 aaPredicted RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 PLCB4Q15147 1175 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 DRICH1Q6PGQ1 229 aaPredicted RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 MMS22LQ6ZRQ5 1243 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 CEP128Q6ZU80 1094 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 ZBTB8OSQ8IWT0 167 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms