RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 GRPEL1Q9HAV7 217 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 ARHGEF37A1IGU5 675 aa24.82■■□□□ 1.56
HOMER3-205ENST00000542541 NT5C1B-RDH14C9J2C7 533 aa24.82■■□□□ 1.56
HOMER3-205ENST00000542541 BMPR1AP36894 532 aa24.82■■□□□ 1.56
HOMER3-205ENST00000542541 PBX3P40426 434 aa24.82■■□□□ 1.56
HOMER3-205ENST00000542541 NOP14P78316 857 aaKnown RBP24.82■■□□□ 1.56
HOMER3-205ENST00000542541 KCNMA1Q12791 1236 aa24.82■■□□□ 1.56
HOMER3-205ENST00000542541 SYCP1Q15431 976 aa24.82■■□□□ 1.56
HOMER3-205ENST00000542541 SLC39A11Q8N1S5 342 aa24.82■■□□□ 1.56
HOMER3-205ENST00000542541 TMEM169Q96HH4 297 aa24.82■■□□□ 1.56
HOMER3-205ENST00000542541 IGSF21Q96ID5 467 aa24.82■■□□□ 1.56
HOMER3-205ENST00000542541 PLVAPQ9BX97 442 aa24.82■■□□□ 1.56
HOMER3-205ENST00000542541 GDAP2Q9NXN4 497 aa24.82■■□□□ 1.56
HOMER3-205ENST00000542541 SLC9A1P19634 815 aa24.81■■□□□ 1.56
HOMER3-205ENST00000542541 AARSP49588 968 aaKnown RBP eCLIP24.81■■□□□ 1.56
HOMER3-205ENST00000542541 TNNC1P63316 161 aa24.81■■□□□ 1.56
HOMER3-205ENST00000542541 DSTYKQ6XUX3 929 aa24.81■■□□□ 1.56
HOMER3-205ENST00000542541 FAM81BQ96LP2 452 aa24.81■■□□□ 1.56
HOMER3-205ENST00000542541 MARCH5Q9NX47 278 aa24.81■■□□□ 1.56
HOMER3-205ENST00000542541 STK39Q9UEW8 545 aa24.81■■□□□ 1.56
HOMER3-205ENST00000542541 YBX2Q9Y2T7 364 aaKnown RBP24.81■■□□□ 1.56
HOMER3-205ENST00000542541 SF3B1O75533 1304 aaKnown RBP eCLIP24.8■■□□□ 1.56
HOMER3-205ENST00000542541 SPTLC1O15269 473 aa24.8■■□□□ 1.56
HOMER3-205ENST00000542541 LINC00271P0C7V0 271 aa24.8■■□□□ 1.56
HOMER3-205ENST00000542541 PBX2P40425 430 aa24.8■■□□□ 1.56
HOMER3-205ENST00000542541 KRT17Q04695 432 aa24.8■■□□□ 1.56
HOMER3-205ENST00000542541 CD300LGQ6UXG3 332 aa24.8■■□□□ 1.56
HOMER3-205ENST00000542541 HASPINQ8TF76 798 aa24.8■■□□□ 1.56
HOMER3-205ENST00000542541 TGS1Q96RS0 853 aaKnown RBP24.8■■□□□ 1.56
HOMER3-205ENST00000542541 SLC28A3Q9HAS3 691 aa24.8■■□□□ 1.56
HOMER3-205ENST00000542541 NXF1Q9UBU9 619 aaKnown RBP24.8■■□□□ 1.56
HOMER3-205ENST00000542541 COLQQ9Y215 455 aaPredicted RBP24.8■■□□□ 1.56
HOMER3-205ENST00000542541 SNX9Q9Y5X1 595 aa24.8■■□□□ 1.56
HOMER3-205ENST00000542541 LRRN2O75325 713 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 ITGB1P05556 798 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 RB1P06400 928 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 CTNNB1P35222 781 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 LRMPQ12912 555 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 LRIT3Q3SXY7 679 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 TIGD5Q53EQ6 642 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 DPH6Q7L8W6 267 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 SUSD3Q96L08 255 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 SENP8Q96LD8 212 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 MMS19Q96T76 1030 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 NIF3L1Q9GZT8 377 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 PLCB1Q9NQ66 1216 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 SIK3Q9Y2K2 1263 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 F8W810 466 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 AP5Z1O43299 807 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 HUS1O60921 280 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 TBXAS1P24557 533 aaPredicted RBP24.79■■□□□ 1.56
HOMER3-205ENST00000542541 MRE11P49959 708 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 SPOPLQ6IQ16 392 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 NEK11Q8NG66 645 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 LSM14BQ9BX40 385 aaKnown RBP24.79■■□□□ 1.56
HOMER3-205ENST00000542541 NKX2-4Q9H2Z4 354 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.79■■□□□ 1.562e-12■■■■■ 298.1
HOMER3-205ENST00000542541 APEX2Q9UBZ4 518 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 DAAM1Q9Y4D1 1078 aa24.79■■□□□ 1.56
HOMER3-205ENST00000542541 M0QZQ0 153 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 CYB561D2O14569 222 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 IGFBP6P24592 240 aaPredicted RBP24.78■■□□□ 1.56
HOMER3-205ENST00000542541 BRCC3P46736 316 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 PLCB3Q01970 1234 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 TAP1Q03518 808 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 PPP2R2DQ66LE6 453 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 FUT10Q6P4F1 479 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 TMEM173Q86WV6 379 aaPredicted RBP24.78■■□□□ 1.56
HOMER3-205ENST00000542541 PPM1KQ8N3J5 372 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 TOP6BLQ8N6T0 577 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 APPL2Q8NEU8 664 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 TATDN2Q93075 761 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 APOBEC3GQ9HC16 384 aaKnown RBP24.78■■□□□ 1.56
HOMER3-205ENST00000542541 TRIOBPQ9H2D6 2365 aa24.78■■□□□ 1.56
HOMER3-205ENST00000542541 C5orf67F2Z3F1 127 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 FGF18O76093 207 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 FAM163BP0C2L3 166 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 ODC1P11926 461 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 RFX1P22670 979 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 DNAJB2P25686 324 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 ERVK-21P61565 698 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 GCNT1Q02742 428 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 PHLDB3Q6NSJ2 640 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 DDX53Q86TM3 631 aaKnown RBP24.77■■□□□ 1.56
HOMER3-205ENST00000542541 KLHL23Q8NBE8 558 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 MRFAP1L1Q96HT8 127 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 C11orf84Q9BUA3 381 aaPredicted RBP24.77■■□□□ 1.56
HOMER3-205ENST00000542541 CYP3A43Q9HB55 503 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 FAM207AQ9NSI2 230 aaPredicted RBP24.77■■□□□ 1.56
HOMER3-205ENST00000542541 PUF60Q9UHX1 559 aaKnown RBP24.77■■□□□ 1.56
HOMER3-205ENST00000542541 DSEQ9UL01 958 aa24.77■■□□□ 1.56
HOMER3-205ENST00000542541 SYN3O14994 580 aa24.76■■□□□ 1.55
HOMER3-205ENST00000542541 PBX1P40424 430 aa24.76■■□□□ 1.55
HOMER3-205ENST00000542541 ZNF75DP51815 510 aa24.76■■□□□ 1.55
HOMER3-205ENST00000542541 MFAP3P55082 362 aa24.76■■□□□ 1.55
HOMER3-205ENST00000542541 KLHDC7AQ5VTJ3 777 aa24.76■■□□□ 1.55
HOMER3-205ENST00000542541 ENOSF1Q7L5Y1 443 aa24.76■■□□□ 1.55
HOMER3-205ENST00000542541 BCL7CQ8WUZ0 217 aaPredicted RBP24.76■■□□□ 1.55
HOMER3-205ENST00000542541 TIFAQ96CG3 184 aa24.76■■□□□ 1.55
HOMER3-205ENST00000542541 C17orf80Q9BSJ5 609 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms