RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 ASB14A6NK59 587 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 AFPP02771 609 aaKnown RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 NFKBIAP25963 317 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 OVGP1Q12889 678 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 ART3Q13508 389 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 LIN9Q5TKA1 542 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 KLHDC7AQ5VTJ3 777 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 PLEKHA7Q6IQ23 1121 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 C6orf89Q6UWU4 347 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 RBM44Q6ZP01 1051 aaKnown RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 LRRC6Q86X45 466 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 FAM13CQ8NE31 585 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 UCMAQ8WVF2 138 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 MTMR8Q96EF0 704 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 C9orf72Q96LT7 481 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 RIOK1Q9BRS2 568 aaKnown RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 UBE2OQ9C0C9 1292 aaKnown RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 HBS1LQ9Y450 684 aaKnown RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 CEMIPQ8WUJ3 1361 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 PMS1P54277 932 aaKnown RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 ALDH18A1P54886 795 aaKnown RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 C21orf59P57076 290 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 QRICH1Q2TAL8 776 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 HP1BP3Q5SSJ5 553 aaPredicted RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 ISLR2Q6UXK2 745 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 NCCRP1Q6ZVX7 275 aaPredicted RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 DCUN1D5Q9BTE7 237 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 KIAA1683Q9H0B3 1180 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 SEMA4AQ9H3S1 761 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 APPL1Q9UKG1 709 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 RPS6KL1Q9Y6S9 549 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 A0A1W2PQJ5 194 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 DYNC1LI2O43237 492 aaPredicted RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 DDHD2O94830 711 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 LYNP07948 512 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 HMOX2P30519 316 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 OSTNP61366 133 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 BFSP1Q12934 665 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 SGSM1Q2NKQ1 1148 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 LDHDQ86WU2 507 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 TBC1D10CQ8IV04 446 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 BTBD10Q9BSF8 475 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 SYT17Q9BSW7 474 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 CNOT8Q9UFF9 292 aaKnown RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 ITSN1Q15811 1721 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 TNS2Q63HR2 1409 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 KBTBD13C9JR72 458 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 OASLQ15646 514 aaKnown RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 PARP6Q2NL67 630 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 MB21D2Q8IYB1 491 aaPredicted RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 GPRC5AQ8NFJ5 357 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 PYROXD1Q8WU10 500 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 LPAR1Q92633 364 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 OMA1Q96E52 524 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 NUDT12Q9BQG2 462 aa13.09□□□□□ -0.31
KDM3A-216ENST00000542128 MTIF3Q9H2K0 278 aaKnown RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 SCHIP1Q9P0W5 487 aaPredicted RBP13.09□□□□□ -0.31
KDM3A-216ENST00000542128 FANCGO15287 622 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 ADCY6O43306 1168 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 TSPAN9O75954 239 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 RARAP10276 462 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 RPL5P46777 297 aaKnown RBP13.08□□□□□ -0.32
KDM3A-216ENST00000542128 BNIP1Q12981 228 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 TRMT5Q32P41 509 aaKnown RBP13.08□□□□□ -0.32
KDM3A-216ENST00000542128 CCDC153Q494R4 210 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 ARL6IP4Q66PJ3 421 aaKnown RBP13.08□□□□□ -0.32
KDM3A-216ENST00000542128 DCUN1D2Q6PH85 259 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 C1orf131Q8NDD1 294 aaKnown RBP13.08□□□□□ -0.32
KDM3A-216ENST00000542128 RSAD2Q8WXG1 361 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 LARP4BQ92615 738 aaKnown RBP13.08□□□□□ -0.32
KDM3A-216ENST00000542128 ZFRQ96KR1 1074 aaKnown RBP13.08□□□□□ -0.32
KDM3A-216ENST00000542128 NRDE2Q9H7Z3 1164 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 PLGRKTQ9HBL7 147 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 SEPT3Q9UH03 358 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 INPP5FQ9Y2H2 1132 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 ARHGEF28Q8N1W1 1705 aaKnown RBP13.08□□□□□ -0.32
KDM3A-216ENST00000542128 COPEO14579 308 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 TLR3O15455 904 aaKnown RBP13.08□□□□□ -0.32
KDM3A-216ENST00000542128 ARHGEF9O43307 516 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 FKBP6O75344 327 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 SEC24DO94855 1032 aaPredicted RBP13.08□□□□□ -0.32
KDM3A-216ENST00000542128 ERO1BQ86YB8 467 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 TRIM59Q8IWR1 403 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 RHOT2Q8IXI1 618 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 EME1Q96AY2 570 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 KMT5AQ9NQR1 393 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 RRN3Q9NYV6 651 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 STK25O00506 426 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 TXNP10599 105 aaKnown RBP13.08□□□□□ -0.32
KDM3A-216ENST00000542128 SKIV2L2P42285 1042 aaKnown RBP13.08□□□□□ -0.32
KDM3A-216ENST00000542128 PIK3CAP42336 1068 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 GTF2A2P52657 109 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 TBC1D25Q3MII6 688 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 GPR141Q7Z602 305 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 NAT14Q8WUY8 206 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 CCDC28BQ9BUN5 200 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 MAF1Q9H063 256 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 PCDHA6Q9UN73 950 aa13.08□□□□□ -0.32
KDM3A-216ENST00000542128 PCDHA8Q9Y5H6 950 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms