RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TMX2Q9Y320 296 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 RABGAP1Q9Y3P9 1069 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 BAZ2AQ9UIF9 1905 aaKnown RBP6.27□□□□□ -1.41
CPSF7-220ENST00000541963 FAM90A27PA6NNH2 459 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 WDR46O15213 610 aaKnown RBP6.27□□□□□ -1.41
CPSF7-220ENST00000541963 FOXP2O15409 715 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 MARCH6O60337 910 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 LTFP02788 710 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 PCP11498 1178 aaKnown RBP6.27□□□□□ -1.41
CPSF7-220ENST00000541963 EEF2P13639 858 aaKnown RBP6.27□□□□□ -1.41
CPSF7-220ENST00000541963 CAPN2P17655 700 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 VCAM1P19320 739 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 CCND1P24385 295 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 MAPK4P31152 587 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 RGS19P49795 217 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 NT5C2P49902 561 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 PHC1P78364 1004 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 PPARAQ07869 468 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 ALX1Q15699 326 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 SHROOM1Q2M3G4 852 aaPredicted RBP6.27□□□□□ -1.41
CPSF7-220ENST00000541963 PAN2Q504Q3 1202 aaKnown RBP6.27□□□□□ -1.41
CPSF7-220ENST00000541963 GPR158Q5T848 1215 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 SYDE2Q5VT97 1194 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 FRMD7Q6ZUT3 714 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 ZC3H18Q86VM9 953 aaKnown RBP6.27□□□□□ -1.41
CPSF7-220ENST00000541963 MB21D1Q8N884 522 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 ZNF610Q8N9Z0 462 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 RUFY2Q8WXA3 655 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 CLEC4DQ8WXI8 215 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 TOE1Q96GM8 510 aaKnown RBP6.27□□□□□ -1.41
CPSF7-220ENST00000541963 ARHGAP39Q9C0H5 1083 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 RPAP3Q9H6T3 665 aaPredicted RBP6.27□□□□□ -1.41
CPSF7-220ENST00000541963 VCPKMTQ9H867 229 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 NYAP2Q9P242 653 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 MORF4L1Q9UBU8 362 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 CTNNA3Q9UI47 895 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 SYNPO2Q9UMS6 1093 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 PTPRFP10586 1907 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 MYH8P13535 1937 aa6.27□□□□□ -1.41
CPSF7-220ENST00000541963 CCDC171Q6TFL3 1326 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 A0A1W2PRG0 241 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 TSPY2A6NKD2 308 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 ZNF213O14771 459 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 FLOT1O75955 427 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 PRKD3O94806 890 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 TTLL1O95922 423 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 FGAP02671 866 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 HSPD1P10809 573 aaKnown RBP6.26□□□□□ -1.41
CPSF7-220ENST00000541963 SDHAP31040 664 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 FNTBP49356 437 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 FLT3LGP49771 235 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 EPHB1P54762 984 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 SOX10P56693 466 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 SMAD3P84022 425 aaKnown RBP6.26□□□□□ -1.41
CPSF7-220ENST00000541963 TFAP4Q01664 338 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 PRKCZQ05513 592 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 LRRC32Q14392 662 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 TERF2Q15554 542 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 SMAD2Q15796 467 aaKnown RBP6.26□□□□□ -1.41
CPSF7-220ENST00000541963 TTC22Q5TAA0 569 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 TIGD7Q6NT04 549 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-220ENST00000541963 CWC27Q6UX04 472 aaKnown RBP6.26□□□□□ -1.41
CPSF7-220ENST00000541963 ETV3LQ6ZN32 361 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 CCDC129Q6ZRS4 1044 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 ARRDC4Q8NCT1 418 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 HIPK4Q8NE63 616 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 WDR48Q8TAF3 677 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 FAM227BQ96M60 508 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 PAGR1Q9BTK6 254 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 RNF41Q9H4P4 317 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-220ENST00000541963 EPB41L4AQ9HCS5 686 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-220ENST00000541963 ARHGAP28Q9P2N2 729 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 RBPJLQ9UBG7 517 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 CLIP2Q9UDT6 1046 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 ANAPC4Q9UJX5 808 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 TRHDEQ9UKU6 1024 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 CTDP1Q9Y5B0 961 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-220ENST00000541963 OAS3Q9Y6K5 1087 aaKnown RBP6.26□□□□□ -1.41
CPSF7-220ENST00000541963 ROBO3Q96MS0 1386 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 LOC285556D6RIA3 1793 aa6.26□□□□□ -1.41
CPSF7-220ENST00000541963 DDX60LQ5H9U9 1706 aaKnown RBP6.25□□□□□ -1.41
CPSF7-220ENST00000541963 A0A0D9SFI3 127 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 GOLGA8AA7E2F4 631 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 GOLGA8BA8MQT2 603 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 F5H6K3 240 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 DVL2O14641 736 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 TGM5O43548 720 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 STRNO43815 780 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 RANBP6O60518 1105 aaKnown RBP6.25□□□□□ -1.41
CPSF7-220ENST00000541963 PRDM1O75626 825 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 FBXO21O94952 628 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 SLC25A27O95847 323 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 CFBP00751 764 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 FAHP16930 419 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 CTGFP29279 349 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 COPB2P35606 906 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 RGS2P41220 211 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 NKX3-2P78367 333 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 KLRC3Q07444 240 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 EPHA7Q15375 998 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms