RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 SLC17A8Q8NDX2 589 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 TET1Q8NFU7 2136 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 LMO3Q8TAP4 145 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 FBXL18Q96ME1 805 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 MKNK1Q9BUB5 465 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 KATNAL1Q9BW62 490 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 RNF208Q9H0X6 261 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 C2orf40Q9H1Z8 148 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 PTPRHQ9HD43 1115 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 SAGE1Q9NXZ1 904 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 KLK14Q9P0G3 267 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 TRIM10Q9UDY6 481 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 PIN4Q9Y237 131 aaKnown RBP8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 NOC2LQ9Y3T9 749 aaKnown RBP8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 DYRK1BQ9Y463 629 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 CDY2AQ9Y6F7 541 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 SCN1AP35498 2009 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 CNTNAP2Q9UHC6 1331 aa8.34□□□□□ -1.07
AC005840.3-201ENST00000541888 SMIM35A0A1B0GVV1 85 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 FAM181BA6NEQ2 426 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 H0YCG3 227 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 ZEB2O60315 1214 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 B4GALT4O60513 344 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 GFPT2O94808 682 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 VNN1O95497 513 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 CST3P01034 146 aaPredicted RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 TPM1P09493 284 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 GHRP10912 638 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 PROZP22891 400 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 HOXC8P31273 242 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 TFAMQ00059 246 aaKnown RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 BIRC3Q13489 604 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 KLHDC7AQ5VTJ3 777 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 TSHZ1Q6ZSZ6 1077 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 RNF180Q86T96 592 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 CNGA4Q8IV77 575 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 KRT222Q8N1A0 295 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 PPM1KQ8N3J5 372 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 ZNF397Q8NF99 534 aaPredicted RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 DIS3LQ8TF46 1054 aaKnown RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 MFSD14AQ96MC6 490 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 FNBP1Q96RU3 617 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 DNAJC7Q99615 494 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 AGO3Q9H9G7 860 aaKnown RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 ETNK1Q9HBU6 452 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 PRMT7Q9NVM4 692 aaPredicted RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 ARHGAP20Q9P2F6 1191 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 STYXL1Q9Y6J8 313 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 OGTO15294 1046 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 STAG3L1P0CL83 205 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 CCL5P13501 91 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 DARSP14868 501 aaKnown RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 EIF4BP23588 611 aaKnown RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 USP8P40818 1118 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 AFF1P51825 1210 aaKnown RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 MCL1Q07820 350 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 EPC2Q52LR7 807 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 TDRD12Q587J7 1177 aaKnown RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 PDXDC1Q6P996 788 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 SCARA5Q6ZMJ2 495 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 FAM228AQ86W67 206 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 OR8K1Q8NGG5 319 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 RABGGTAQ92696 567 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 PANX2Q96RD6 677 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 GAS2L1Q99501 681 aaPredicted RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 GPR88Q9GZN0 384 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 UBE2TQ9NPD8 197 aaPredicted RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 LZTFL1Q9NQ48 299 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 STARD7Q9NQZ5 370 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 SNTG2Q9NY99 539 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 DNAJC12Q9UKB3 198 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 CPSF3Q9UKF6 684 aaKnown RBP8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 NOD1Q9Y239 953 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 PPME1Q9Y570 386 aa8.33□□□□□ -1.08
AC005840.3-201ENST00000541888 PDCD11Q14690 1871 aaKnown RBP8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 LACTBL1A8MY62 500 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 ZNF263O14978 683 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 ASAP2O43150 1006 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 HLA-DRAP01903 254 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 KRT19P08727 400 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 IGFBP6P24592 240 aaPredicted RBP8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 EIF4A3P38919 411 aaKnown RBP8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 PIK3CAP42336 1068 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 ZBED6P86452 979 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 GFPT1Q06210 699 aaPredicted RBP8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 ORC1Q13415 861 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 TERF2Q15554 542 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 DBN1Q16643 649 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 ZNF618Q5T7W0 954 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 JADE1Q6IE81 842 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 SLFN12LQ6IEE8 588 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 RIPOR1Q6ZS17 1223 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 SERINC5Q86VE9 423 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 EXOC8Q8IYI6 725 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 RNF169Q8NCN4 708 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 LPPQ93052 612 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 GLT1D1Q96MS3 346 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 SPAG5Q96R06 1193 aa8.32□□□□□ -1.08
AC005840.3-201ENST00000541888 CELF4Q9BZC1 486 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms