RNA–Protein interactions for RNA: ENST00000541694.5

LINC01089-208, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 2

Gene LINC01089, Length 875 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-208ENST00000541694 PTPN21Q16825 1174 aa16.13■□□□□ 0.17
LINC01089-208ENST00000541694 ZNF667Q5HYK9 610 aa16.13■□□□□ 0.17
LINC01089-208ENST00000541694 SPOPLQ6IQ16 392 aa16.13■□□□□ 0.17
LINC01089-208ENST00000541694 TRIM65Q6PJ69 517 aa16.13■□□□□ 0.17
LINC01089-208ENST00000541694 LMO3Q8TAP4 145 aa16.13■□□□□ 0.17
LINC01089-208ENST00000541694 CLP1Q92989 425 aaKnown RBP16.13■□□□□ 0.17
LINC01089-208ENST00000541694 NT5C1BQ96P26 610 aa16.13■□□□□ 0.17
LINC01089-208ENST00000541694 ERGIC2Q96RQ1 377 aa16.13■□□□□ 0.17
LINC01089-208ENST00000541694 LSM14BQ9BX40 385 aaKnown RBP16.13■□□□□ 0.17
LINC01089-208ENST00000541694 PBX4Q9BYU1 374 aa16.13■□□□□ 0.17
LINC01089-208ENST00000541694 MARCH5Q9NX47 278 aa16.13■□□□□ 0.17
LINC01089-208ENST00000541694 SPG21Q9NZD8 308 aa16.13■□□□□ 0.17
LINC01089-208ENST00000541694 NXF1Q9UBU9 619 aaKnown RBP16.13■□□□□ 0.17
LINC01089-208ENST00000541694 YBX2Q9Y2T7 364 aaKnown RBP16.13■□□□□ 0.17
LINC01089-208ENST00000541694 KPNA7A9QM74 516 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 SPTLC1O15269 473 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 STAU1O95793 577 aaKnown RBP16.12■□□□□ 0.17
LINC01089-208ENST00000541694 PAX3P23760 479 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 CTNNB1P35222 781 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 PPM1AP35813 382 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 TNNC1P63316 161 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 WDR72Q3MJ13 1102 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 LRIT3Q3SXY7 679 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 CD300LGQ6UXG3 332 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 DSTYKQ6XUX3 929 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 TMEM173Q86WV6 379 aaPredicted RBP16.12■□□□□ 0.17
LINC01089-208ENST00000541694 SLC39A11Q8N1S5 342 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 NKX2-4Q9H2Z4 354 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 VRTNQ9H8Y1 702 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 ADAM28Q9UKQ2 775 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 SIK3Q9Y2K2 1263 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 RWDD3Q9Y3V2 267 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 SNX9Q9Y5X1 595 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 PLXNA4Q9HCM2 1894 aa16.12■□□□□ 0.17
LINC01089-208ENST00000541694 A0A1W2PQC6 194 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 I3L4J1 428 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 TRAPPC3O43617 180 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 ARHGEF15O94989 841 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 LINC00271P0C7V0 271 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 P4HA1P13674 534 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 BRCC3P46736 316 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 KLK7P49862 253 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 TIGD5Q53EQ6 642 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 SCARA5Q6ZMJ2 495 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 PPM1KQ8N3J5 372 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 NEK11Q8NG66 645 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 BCL7CQ8WUZ0 217 aaPredicted RBP16.11■□□□□ 0.17
LINC01089-208ENST00000541694 TATDN2Q93075 761 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 TMEM169Q96HH4 297 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 IGSF21Q96ID5 467 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 MMS19Q96T76 1030 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 NIF3L1Q9GZT8 377 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 APOBEC3GQ9HC16 384 aaKnown RBP16.11■□□□□ 0.17
LINC01089-208ENST00000541694 FAM207AQ9NSI2 230 aaPredicted RBP16.11■□□□□ 0.17
LINC01089-208ENST00000541694 POLIQ9UNA4 740 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 SF3B1O75533 1304 aaKnown RBP eCLIP16.11■□□□□ 0.175e-7■■■■■ 77.1
LINC01089-208ENST00000541694 VWA8A3KMH1 1905 aa16.11■□□□□ 0.17
LINC01089-208ENST00000541694 TSC2P49815 1807 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 ARHGEF37A1IGU5 675 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 CYB561D2O14569 222 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 BMPR1AP36894 532 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 AARSP49588 968 aaKnown RBP eCLIP16.1■□□□□ 0.17
LINC01089-208ENST00000541694 MRE11P49959 708 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 ZNF75DP51815 510 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 SMAD3P84022 425 aaKnown RBP16.1■□□□□ 0.17
LINC01089-208ENST00000541694 APBA1Q02410 837 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 TAP1Q03518 808 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 ELAVL2Q12926 359 aaKnown RBP16.1■□□□□ 0.17
LINC01089-208ENST00000541694 PPP2R2DQ66LE6 453 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 FUT10Q6P4F1 479 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 ARHGEF19Q8IW93 802 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 SUSD3Q96L08 255 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 SENP8Q96LD8 212 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 SAMD11Q96NU1 681 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 TGS1Q96RS0 853 aaKnown RBP16.1■□□□□ 0.17
LINC01089-208ENST00000541694 C17orf80Q9BSJ5 609 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 SIX2Q9NPC8 291 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 PLCB1Q9NQ66 1216 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 GDAP2Q9NXN4 497 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 APEX2Q9UBZ4 518 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 MTUS1Q9ULD2 1270 aa16.1■□□□□ 0.17
LINC01089-208ENST00000541694 HUS1O60921 280 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 FGF18O76093 207 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 ODC1P11926 461 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 TBXAS1P24557 533 aaPredicted RBP16.09■□□□□ 0.17
LINC01089-208ENST00000541694 DNAJB2P25686 324 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 PBX1P40424 430 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 KRT17Q04695 432 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 KLHDC7AQ5VTJ3 777 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 PHLDB3Q6NSJ2 640 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 RRAGAQ7L523 313 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 KLHL23Q8NBE8 558 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 APPL2Q8NEU8 664 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 PLVAPQ9BX97 442 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 GPR62Q9BZJ7 368 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 SLC28A3Q9HAS3 691 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 UBE2TQ9NPD8 197 aaPredicted RBP16.09■□□□□ 0.17
LINC01089-208ENST00000541694 PCDHB8Q9UN66 801 aa16.09■□□□□ 0.17
LINC01089-208ENST00000541694 M0QZQ0 153 aa16.08■□□□□ 0.16
LINC01089-208ENST00000541694 ADCY5O95622 1261 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms