RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 ADCY9O60503 1353 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 TRAV6A0A075B6T7 132 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 PNMA6FA0A0J9YX94 578 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 ILVBLA1L0T0 632 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 GRID2IPA4D2P6 1211 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 LRRC72A6NJI9 287 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 FAM25AB3EWG3 89 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 FAM25CB3EWG5 89 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 FAM25GB3EWG6 89 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 F8W031 263 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 IFRD1O00458 451 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SHOXO15266 292 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SCO2O43819 266 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 ACSL4O60488 711 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 CCNT1O60563 726 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 RNGTTO60942 597 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 PLEKHA8P1O95397 391 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 IFNA16P05015 189 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 P4HBP07237 508 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 CAPN1P07384 714 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 RETP07949 1114 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 PCNAP12004 261 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 GFAPP14136 432 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 GRIK1P39086 918 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 CAP2P40123 477 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SLC26A3P40879 764 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 PRCPP42785 496 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 MTHFRP42898 656 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 ME1P48163 572 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SLC9A3P48764 834 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 AP2S1P53680 142 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 BPIFB3P59826 476 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 PRKCQQ04759 706 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 FAPQ12884 760 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 COASYQ13057 564 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 MTX1Q13505 466 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 RRS1Q15050 365 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 KCNJ8Q15842 424 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 QPCTQ16769 361 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SPRED3Q2MJR0 410 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 CFAP221Q4G0U5 840 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 TDRD12Q587J7 1177 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 MORN1Q5T089 497 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 CFAP70Q5T0N1 1121 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SHEQ5VZ18 495 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 RESP18Q5W5W9 173 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 PDXDC2PQ6P474 469 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 IKBIPQ70UQ0 350 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 RALYLQ86SE5 291 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 ADGRG6Q86SQ4 1221 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 FAM83AQ86UY5 434 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 CCDC25Q86WR0 208 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 PALB2Q86YC2 1186 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 CAMK1DQ8IU85 385 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 NKAIN4Q8IVV8 208 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 ELMOD2Q8IZ81 293 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SH2D3CQ8N5H7 860 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 TTLQ8NG68 377 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 OR52K2Q8NGK3 314 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 TEX47Q8TBZ9 253 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 UCMAQ8WVF2 138 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 PRPF31Q8WWY3 499 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 PRCCQ92733 491 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 NMD3Q96D46 503 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 PRICKLE1Q96MT3 831 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 OPALINQ96PE5 141 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 BTBD9Q96Q07 612 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 MMS19Q96T76 1030 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 LLPHQ9BRT6 129 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 ALG1Q9BT22 464 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 DSCC1Q9BVC3 393 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 KIFC3Q9BVG8 833 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 TDRD1Q9BXT4 1180 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 VPS11Q9H270 941 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 THAP9Q9H5L6 903 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 MRPL44Q9H9J2 332 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SYTL2Q9HCH5 934 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 RIC8AQ9NPQ8 531 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 AVENQ9NQS1 362 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SDHAF3Q9NRP4 125 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 ABI2Q9NYB9 513 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 PKD2L1Q9P0L9 805 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF69Q9UC07 566 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 MOSPD1Q9UJG1 213 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 VPS4AQ9UN37 437 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SLC8A2Q9UPR5 921 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 UTP11Q9Y3A2 253 aaKnown RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 MAFBQ9Y5Q3 323 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SNX5Q9Y5X3 404 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 CYP46A1Q9Y6A2 500 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 CAPN6Q9Y6Q1 641 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 ARHGEF11O15085 1522 aa5.46□□□□□ -1.54
SNHG1-218ENST00000541615 SOS2Q07890 1332 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-218ENST00000541615 ATP7BP35670 1465 aa5.45□□□□□ -1.54
SNHG1-218ENST00000541615 MRC2Q9UBG0 1479 aa5.45□□□□□ -1.54
SNHG1-218ENST00000541615 ABCC3O15438 1527 aa5.45□□□□□ -1.54
SNHG1-218ENST00000541615 C17orf113A0A1B0GUU1 675 aa5.45□□□□□ -1.54
SNHG1-218ENST00000541615 TLDC2A0PJX2 215 aa5.45□□□□□ -1.54
SNHG1-218ENST00000541615 OR5K3A6NET4 321 aa5.45□□□□□ -1.54
SNHG1-218ENST00000541615 SMCO2A6NFE2 343 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms