RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 A8MXQ7 604 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 AKAP5P24588 427 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 CDC16Q13042 620 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 RCN1Q15293 331 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 TMC4Q7Z404 712 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 QKIQ96PU8 341 aaKnown RBP eCLIP16.06■□□□□ 0.164e-7■■■■□ 24.2
HMGA2-210ENST00000541363 YWHAQP27348 245 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 PHKA1P46020 1223 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 NPEPPSP55786 919 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 ZNF200P98182 395 aaPredicted RBP16.06■□□□□ 0.16
HMGA2-210ENST00000541363 C1orf54Q8WWF1 131 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 PPCSQ9HAB8 311 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 PSMC3IPQ9P2W1 217 aaPredicted RBP16.06■□□□□ 0.16
HMGA2-210ENST00000541363 ATP6V1B1P15313 513 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 AP1S2P56377 157 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 NFRKBQ6P4R8 1299 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 USP17L2Q6R6M4 530 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 ASNA1O43681 348 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 AGTP01019 485 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 C12orf60Q5U649 245 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 COMMD2Q86X83 199 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 SH3GLB1Q9Y371 365 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 PIK3R1P27986 724 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 AKIRIN2Q53H80 203 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 CYFIP2Q96F07 1278 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 UBXN6Q9BZV1 441 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 PDE9AO76083 593 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 MFN2O95140 757 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 GSTM1P09488 218 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 KRT20P35900 424 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 KCNH2Q12809 1159 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 ZNF560Q96MR9 790 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 STN1Q9H668 368 aaKnown RBP16.05■□□□□ 0.16
HMGA2-210ENST00000541363 ZNF302Q9NR11 478 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 ATP1A1P05023 1023 aaKnown RBP16.05■□□□□ 0.16
HMGA2-210ENST00000541363 CACNB2Q08289 660 aaPredicted RBP16.05■□□□□ 0.16
HMGA2-210ENST00000541363 CACHD1Q5VU97 1274 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 RGS18Q9NS28 235 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 GTF2E2P29084 291 aaKnown RBP16.05■□□□□ 0.16
HMGA2-210ENST00000541363 AP3M2P53677 418 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 MACC1Q6ZN28 852 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 PEG10Q86TG7 708 aaKnown RBP16.05■□□□□ 0.16
HMGA2-210ENST00000541363 TNIP3Q96KP6 325 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 AGAP3Q96P47 875 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 TINF2Q9BSI4 451 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 KLHL3Q9UH77 587 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 EIF3LQ9Y262 564 aaKnown RBP16.05■□□□□ 0.16
HMGA2-210ENST00000541363 TRPC5OSA6NMA1 111 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 DDHD2O94830 711 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 POU4F1Q01851 419 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 BNIPLQ7Z465 357 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 INTS13Q9NVM9 706 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 ING3Q9NXR8 418 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 PDP2Q9P2J9 529 aa16.05■□□□□ 0.16
HMGA2-210ENST00000541363 LGALS16A8MUM7 142 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 CNOT3O75175 753 aaKnown RBP16.04■□□□□ 0.16
HMGA2-210ENST00000541363 ECDO95905 644 aaPredicted RBP16.04■□□□□ 0.16
HMGA2-210ENST00000541363 ATL2Q8NHH9 583 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 CYP51A1Q16850 503 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 LINC00301Q8NCQ3 95 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 APOL5Q9BWW9 433 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 RMND5AQ9H871 391 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 AP3B2Q13367 1082 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 EDRF1Q3B7T1 1238 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 ARMC4Q5T2S8 1044 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 IL31Q6EBC2 164 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 PCMTD2Q9NV79 361 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 GGT7Q9UJ14 662 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 CYP2D7A0A087X1C5 515 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 OTOAQ7RTW8 1153 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 ARHGEF26Q96DR7 871 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 IQCA1LA6NCM1 817 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 KIF12Q96FN5 646 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 EPC1Q9H2F5 836 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 ADGRA3Q8IWK6 1321 aa16.04■□□□□ 0.16
HMGA2-210ENST00000541363 PTK6Q13882 451 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 SNX17Q15036 470 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 CAMKK2Q96RR4 588 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 THUMPD3Q9BV44 507 aaKnown RBP16.03■□□□□ 0.16
HMGA2-210ENST00000541363 FAM153AQ9UHL3 310 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 VHLP40337 213 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 KLHL11Q9NVR0 708 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 MARCOQ9UEW3 520 aaPredicted RBP16.03■□□□□ 0.16
HMGA2-210ENST00000541363 MAP3K19Q56UN5 1328 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 DRAP1Q14919 205 aaPredicted RBP16.03■□□□□ 0.16
HMGA2-210ENST00000541363 STKLD1Q8NE28 680 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 ZNF473Q8WTR7 871 aaKnown RBP16.03■□□□□ 0.16
HMGA2-210ENST00000541363 DCAF4Q8WV16 495 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 ZNF341Q9BYN7 854 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 DGKIO75912 1065 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 CHN1P15882 459 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 TWF1Q12792 350 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 NT5DC4Q86YG4 428 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 LGR6Q9HBX8 967 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 VWA5AO00534 786 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 HOXD10P28358 340 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 NDUFAF6Q330K2 333 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms