RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, human

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-211	ENST00000541351	REXO1	Q8N1G1	1221 aa	Known RBP	10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	CMTR1	Q8N1G2	835 aa	Known RBP	10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	PNPLA1	Q8N8W4	532 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	FANCB	Q8NB91	859 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	ENGASE	Q8NFI3	743 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	SHKBP1	Q8TBC3	707 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	BICD2	Q8TD16	824 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	WHAMM	Q8TF30	809 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	TMEM87B	Q96K49	555 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	CEP170P1	Q96L14	293 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	ADPGK	Q9BRR6	497 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	TPSD1	Q9BZJ3	242 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	BARHL2	Q9NY43	387 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	SUSD2	Q9UGT4	822 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	PILRB	Q9UKJ0	227 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	INVS	Q9Y283	1065 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	ASB3	Q9Y575	518 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	EML5	Q05BV3	1969 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351	VWA8	A3KMH1	1905 aa		10.45	□□□□□ -0.74
YBX3-211	ENST00000541351		B8ZZF3	427 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	CCER2	I3L3R5	266 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	NRG2	O14511	850 aa	Predicted RBP	10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	SH3BP5	O60239	455 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	GJA1	P17302	382 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	ARF4	P18085	180 aa	Predicted RBP	10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	BCKDHB	P21953	392 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	TKT	P29401	623 aa	Known RBP	10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	GNA11	P29992	359 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	ALDH1A3	P47895	512 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	CSRP3	P50461	194 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	TNK2	Q07912	1038 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	PPP4R3A	Q6IN85	833 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	ZNF280D	Q6N043	979 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	ITIH5	Q86UX2	942 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	PLEKHM2	Q8IWE5	1019 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	ABCA7	Q8IZY2	2146 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	FAM181A	Q8N9Y4	354 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	SPRYD3	Q8NCJ5	442 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	CRYGN	Q8WXF5	182 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	TMEM143	Q96AN5	459 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	NXPE2	Q96DL1	559 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	CRELD1	Q96HD1	420 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	PRIMPOL	Q96LW4	560 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	CDC6	Q99741	560 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	ARID3A	Q99856	593 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	SH2D3A	Q9BRG2	576 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	NFKBIZ	Q9BYH8	718 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	ZDHHC5	Q9C0B5	715 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	ATXN3L	Q9H3M9	355 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	UNC45A	Q9H3U1	944 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	DHX33	Q9H6R0	707 aa	Known RBP	10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	CEP72	Q9P209	647 aa		10.44	□□□□□ -0.74
YBX3-211	ENST00000541351	NCAN	O14594	1321 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	CELSR3	Q9NYQ7	3312 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351		A0A1B0GUA9	196 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351		E7EWF7	191 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	CPB1	P15086	417 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	GNS	P15586	552 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	MCM5	P33992	734 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	LIFR	P42702	1097 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	RHD	Q02161	417 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	NR1H3	Q13133	447 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	TMEM132A	Q24JP5	1023 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	PREPL	Q4J6C6	727 aa	Predicted RBP	10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	CTXN3	Q4LDR2	81 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	GPR158	Q5T848	1215 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	SLC36A4	Q6YBV0	504 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	ANO5	Q75V66	913 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	ARMCX6	Q7L4S7	300 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	CPA6	Q8N4T0	437 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	APPL2	Q8NEU8	664 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	SLC5A5	Q92911	643 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	CD101	Q93033	1021 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	RSPRY1	Q96DX4	576 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	MTR	Q99707	1265 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	KIF9	Q9HAQ2	790 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	CAPN10	Q9HC96	672 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	GKN1	Q9NS71	199 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	CACNG4	Q9UBN1	327 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	COL6A6	A6NMZ7	2263 aa		10.43	□□□□□ -0.74
YBX3-211	ENST00000541351	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	ESYT2	A0FGR8	921 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	ENO4	A6NNW6	628 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	N4BP3	O15049	544 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	MSH4	O15457	936 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	CYP21A2	P08686	494 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	CDC25C	P30307	473 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	P2RY2	P41231	377 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	IL12RB1	P42701	662 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	PTGER3	P43115	390 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	QARS	P47897	775 aa	Known RBP	10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	GALK1	P51570	392 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	USP11	P51784	963 aa		10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	CACNB1	Q02641	598 aa	Predicted RBP	10.42	□□□□□ -0.74
YBX3-211	ENST00000541351	BFSP1	Q12934	665 aa		10.42	□□□□□ -0.74

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