RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 NBPF20Q3BBV1 942 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 DUSP28Q4G0W2 176 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 HERC4Q5GLZ8 1057 aaPredicted RBP11.09□□□□□ -0.63
CHFR-219ENST00000541341 SEL1L2Q5TEA6 688 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 PPP1R2P3Q6NXS1 205 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 RNF207Q6ZRF8 634 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 APBB1IPQ7Z5R6 666 aaPredicted RBP11.09□□□□□ -0.63
CHFR-219ENST00000541341 RPUSD2Q8IZ73 545 aaKnown RBP11.09□□□□□ -0.63
CHFR-219ENST00000541341 AGGF1Q8N302 714 aaeCLIP11.09□□□□□ -0.631e-6■■■■■ 29.4
CHFR-219ENST00000541341 TBC1D31Q96DN5 1066 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 FAM81BQ96LP2 452 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 PNMA5Q96PV4 448 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 UHRF1Q96T88 793 aaPredicted RBP11.09□□□□□ -0.63
CHFR-219ENST00000541341 STK33Q9BYT3 514 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 PSTPIP2Q9H939 334 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 RXFP1Q9HBX9 757 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 UBN1Q9NPG3 1134 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 EHD2Q9NZN4 543 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 KCND2Q9NZV8 630 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 KLHL14Q9P2G3 628 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 SALL4Q9UJQ4 1053 aa11.09□□□□□ -0.63
CHFR-219ENST00000541341 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.09□□□□□ -0.63
CHFR-219ENST00000541341 MICAL3Q7RTP6 2002 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 ATG2AQ2TAZ0 1938 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 ESYT3A0FGR9 886 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 TCEA3O75764 348 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 ARIH2O95376 493 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 FOSP01100 380 aaPredicted RBP11.08□□□□□ -0.64
CHFR-219ENST00000541341 VIMP08670 466 aaKnown RBP11.08□□□□□ -0.64
CHFR-219ENST00000541341 NQO1P15559 274 aaKnown RBP11.08□□□□□ -0.64
CHFR-219ENST00000541341 CHN1P15882 459 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 NR2F2P24468 414 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 SLC18A1P54219 525 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 COPS2P61201 443 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 RPS6P62753 249 aaKnown RBP11.08□□□□□ -0.64
CHFR-219ENST00000541341 MRPS35P82673 323 aaKnown RBP11.08□□□□□ -0.64
CHFR-219ENST00000541341 MRPS5P82675 430 aaKnown RBP11.08□□□□□ -0.64
CHFR-219ENST00000541341 PTK2Q05397 1052 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 MAPK7Q13164 816 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 AP3B2Q13367 1082 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 RBBP5Q15291 538 aaKnown RBP11.08□□□□□ -0.64
CHFR-219ENST00000541341 DYMQ7RTS9 669 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 ARNTL2Q8WYA1 636 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 SLCO2A1Q92959 643 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 DNAJC19Q96DA6 116 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 PLIN2Q99541 437 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 MTG1Q9BT17 334 aaPredicted RBP11.08□□□□□ -0.64
CHFR-219ENST00000541341 VCXQ9H320 206 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 NKIRAS1Q9NYS0 192 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 SENP1Q9P0U3 644 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 DDX25Q9UHL0 483 aaKnown RBP11.08□□□□□ -0.64
CHFR-219ENST00000541341 NENFQ9UMX5 172 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 DNM3Q9UQ16 869 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 ATP8A1Q9Y2Q0 1164 aa11.08□□□□□ -0.64
CHFR-219ENST00000541341 CYP3A7-CYP3A51PA0A087WV96 503 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 ADAMTS3O15072 1205 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 EPHB6O15197 1021 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 SNX3O60493 162 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 DCTN3O75935 186 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 NEBLO76041 1014 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 CFBP00751 764 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 FGGP02679 453 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 PLA2G4BP0C869 781 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 POLR2MP0CAP2 368 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 TXNP10599 105 aaKnown RBP11.07□□□□□ -0.64
CHFR-219ENST00000541341 ITIH2P19823 946 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 TNFAIP3P21580 790 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 CYP3A7P24462 503 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 SOX5P35711 763 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 PSMC2P35998 433 aaKnown RBP11.07□□□□□ -0.64
CHFR-219ENST00000541341 CPT1AP50416 773 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 SNRPFP62306 86 aaKnown RBP11.07□□□□□ -0.64
CHFR-219ENST00000541341 POU5F1Q01860 360 aaKnown RBP11.07□□□□□ -0.64
CHFR-219ENST00000541341 STRN3Q13033 797 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 ALCAMQ13740 583 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 TSNAXIP1Q2TAA8 658 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 RNF43Q68DV7 783 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 SEPT14Q6ZU15 432 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 DNERQ8NFT8 737 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 SYTL5Q8TDW5 730 aaPredicted RBP11.07□□□□□ -0.64
CHFR-219ENST00000541341 CRYGNQ8WXF5 182 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 INPP5DQ92835 1189 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 KLHL29Q96CT2 875 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 FAM20AQ96MK3 541 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 TMEM237Q96Q45 408 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 SELENOSQ9BQE4 189 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 PHACTR1Q9C0D0 580 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 KCTD10Q9H3F6 313 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 WHRNQ9P202 907 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 CTTNBP2NLQ9P2B4 639 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 AMACRQ9UHK6 382 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 NOD1Q9Y239 953 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 PCDHA11Q9Y5I1 949 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 KAT6AQ92794 2004 aa11.07□□□□□ -0.64
CHFR-219ENST00000541341 TBCAO75347 108 aaKnown RBP11.06□□□□□ -0.64
CHFR-219ENST00000541341 ANP32DO95626 131 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 EYA4O95677 639 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 CLTAP09496 248 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 NEFHP12036 1026 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms