RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 APPL2Q8NEU8 664 aa15.42■□□□□ 0.06
LTBR-209ENST00000541102 SLC7A14Q8TBB6 771 aa15.42■□□□□ 0.06
LTBR-209ENST00000541102 ZNF507Q8TCN5 953 aa15.42■□□□□ 0.06
LTBR-209ENST00000541102 NOC3LQ8WTT2 800 aaKnown RBP15.42■□□□□ 0.06
LTBR-209ENST00000541102 SUSD3Q96L08 255 aa15.42■□□□□ 0.06
LTBR-209ENST00000541102 MAN1B1Q9UKM7 699 aa15.42■□□□□ 0.06
LTBR-209ENST00000541102 MAPK8IP1Q9UQF2 711 aa15.42■□□□□ 0.06
LTBR-209ENST00000541102 STYXL1Q9Y6J8 313 aa15.42■□□□□ 0.06
LTBR-209ENST00000541102 C2orf16Q68DN1 1984 aa15.42■□□□□ 0.06
LTBR-209ENST00000541102 CLUHO75153 1309 aa15.42■□□□□ 0.06
LTBR-209ENST00000541102 GOLGA6L22H0YM25 854 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 BIN1O00499 593 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 TGFB1I1O43294 461 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 ADRB2P07550 413 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 NFICP08651 508 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 HNRNPA1P09651 372 aaKnown RBP eCLIP15.41■□□□□ 0.06
LTBR-209ENST00000541102 LRPAP1P30533 357 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 SIGLEC14Q08ET2 396 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 KCNB1Q14721 858 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 TMEM132DQ14C87 1099 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 SPATA1Q5VX52 437 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 DSTYKQ6XUX3 929 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 GRASPQ7Z6J2 395 aaPredicted RBP15.41■□□□□ 0.06
LTBR-209ENST00000541102 BEST2Q8NFU1 509 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 SMARCE1Q969G3 411 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 PBXIP1Q96AQ6 731 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 TSPAN18Q96SJ8 248 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 RHOBTB2Q9BYZ6 727 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 SMOC2Q9H3U7 446 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 FBXL5Q9UKA1 691 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 PCDHB8Q9UN66 801 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 SORCS3Q9UPU3 1222 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 HCN4Q9Y3Q4 1203 aa15.41■□□□□ 0.06
LTBR-209ENST00000541102 TIMM13Q9Y5L4 95 aaPredicted RBP15.41■□□□□ 0.06
LTBR-209ENST00000541102 PPEF2O14830 753 aa15.4■□□□□ 0.06
LTBR-209ENST00000541102 EIF3DO15371 548 aaKnown RBP eCLIP15.4■□□□□ 0.06
LTBR-209ENST00000541102 N4BP1O75113 896 aaKnown RBP15.4■□□□□ 0.06
LTBR-209ENST00000541102 NTHL1P78549 312 aa15.4■□□□□ 0.06
LTBR-209ENST00000541102 ROR1Q01973 937 aa15.4■□□□□ 0.06
LTBR-209ENST00000541102 ALCAMQ13740 583 aa15.4■□□□□ 0.06
LTBR-209ENST00000541102 GET4Q7L5D6 327 aaPredicted RBP15.4■□□□□ 0.06
LTBR-209ENST00000541102 SAAL1Q96ER3 474 aa15.4■□□□□ 0.06
LTBR-209ENST00000541102 MYADMQ96S97 322 aa15.4■□□□□ 0.06
LTBR-209ENST00000541102 FAM213AQ9BRX8 229 aa15.4■□□□□ 0.06
LTBR-209ENST00000541102 ASB7Q9H672 318 aa15.4■□□□□ 0.06
LTBR-209ENST00000541102 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.4■□□□□ 0.06
LTBR-209ENST00000541102 PDCD11Q14690 1871 aaKnown RBP15.4■□□□□ 0.06
LTBR-209ENST00000541102 GOLGA8IPA6NC78 632 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 GOLGA8JA6NMD2 632 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 PRRG1O14668 218 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 XYLBO75191 536 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 SMC2O95347 1197 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 CD44P16070 742 aaKnown RBP15.39■□□□□ 0.05
LTBR-209ENST00000541102 FSHRP23945 695 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 ELF1P32519 619 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 PSMD2Q13200 908 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 MTMR3Q13615 1198 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 MRPL58Q14197 206 aaKnown RBP15.39■□□□□ 0.05
LTBR-209ENST00000541102 BMT2Q1RMZ1 405 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 UVSSAQ2YD98 709 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 C9orf57Q5W0N0 161 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 SLC8B1Q6J4K2 584 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 ZNF280DQ6N043 979 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 CRELD2Q6UXH1 353 aaPredicted RBP15.39■□□□□ 0.05
LTBR-209ENST00000541102 USP37Q86T82 979 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 ZNF461Q8TAF7 563 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 MFSD14AQ96MC6 490 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 GSDMAQ96QA5 445 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 CBWD1Q9BRT8 395 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 KCTD10Q9H3F6 313 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 PCIF1Q9H4Z3 704 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 TMEM206Q9H813 350 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 KIAA1468Q9P260 1216 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 DERAQ9Y315 318 aa15.39■□□□□ 0.05
LTBR-209ENST00000541102 DOCK6Q96HP0 2047 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 WDR27A2RRH5 827 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 M0QZQ0 153 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 CLIC2O15247 247 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 TBC1D4O60343 1298 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 ABLIM3O94929 683 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 PAPLNO95428 1278 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 PRCPP42785 496 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 LILRA4P59901 499 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 MORC3Q14149 939 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 STXBP4Q6ZWJ1 553 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 UBALD2Q8IYN6 164 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 ST13P5Q8NFI4 369 aaPredicted RBP15.38■□□□□ 0.05
LTBR-209ENST00000541102 RSAD2Q8WXG1 361 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 NUP62CLQ9H1M0 184 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 KCNK12Q9HB15 430 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 CYP4F11Q9HBI6 524 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 HCFC1R1Q9NWW0 138 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 DPP3Q9NY33 737 aa15.38■□□□□ 0.05
LTBR-209ENST00000541102 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.38■□□□□ 0.052e-10■□□□□ 8.8
LTBR-209ENST00000541102 HOOK1Q9UJC3 728 aaKnown RBP15.38■□□□□ 0.05
LTBR-209ENST00000541102 PIRO00625 290 aa15.37■□□□□ 0.05
LTBR-209ENST00000541102 SPTLC1O15269 473 aa15.37■□□□□ 0.05
LTBR-209ENST00000541102 IL18RAPO95256 599 aa15.37■□□□□ 0.05
LTBR-209ENST00000541102 SEC24AO95486 1093 aa15.37■□□□□ 0.05
LTBR-209ENST00000541102 LDHAP00338 332 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms