RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TRABD2AQ86V40 505 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 MAB21L3Q8N8X9 362 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 LRRN4Q8WUT4 740 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 BICD1Q96G01 975 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 LRRC37BQ96QE4 947 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 TAAR1Q96RJ0 339 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 NUDCD1Q96RS6 583 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 OSBPL1AQ9BXW6 950 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 EURLQ9NYK6 297 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 F8VP50 259 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 LGR5O75473 907 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 SMNDC1O75940 238 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 CCNB1P14635 433 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 RFX1P22670 979 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 PIK3CAP42336 1068 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 NSFP46459 744 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 POLGP54098 1239 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 MSS51Q4VC12 460 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 ANKRD22Q5VYY1 191 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 ANO5Q75V66 913 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 IFT74Q96LB3 600 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 DENND2DQ9H6A0 471 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 PIDD1Q9HB75 910 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 NRXN2Q9P2S2 1712 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 ITGBL1O95965 494 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 LINGO3P0C6S8 592 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 KRT4P19013 534 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 IL9RQ01113 521 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 MTMR1Q13613 665 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 EAPPQ56P03 285 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 THEMIS2Q5TEJ8 643 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 LVRNQ6Q4G3 990 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 OTOAQ7RTW8 1153 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 DTX3LQ8TDB6 740 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 FBF1Q8TES7 1133 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 PTPRN2Q92932 1015 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 ZBTB10Q96DT7 871 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 MIPEPQ99797 713 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 TMEM8AQ9HCN3 771 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 FBXO6Q9NRD1 293 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 SLC17A7Q9P2U7 560 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 IVNS1ABPQ9Y6Y0 642 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 A0A0G2JND7 137 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 TNNI1P19237 187 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 KLRC2P26717 231 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 CPA2P48052 419 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 CYP24A1Q07973 514 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 MDH1BQ5I0G3 518 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 KCNT1Q5JUK3 1230 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 DSTYKQ6XUX3 929 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 TTC7BQ86TV6 843 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 UCMAQ8WVF2 138 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 NAF1Q96HR8 494 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 APOBEC3GQ9HC16 384 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 AGO4Q9HCK5 861 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 KMT5AQ9NQR1 393 aa10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 MYH9P35579 1960 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-207ENST00000540998 DNAH12Q6ZR08 3092 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 DPPA5A6NC42 116 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 TLR3O15455 904 aaKnown RBP10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 ZBED4O75132 1171 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 CHRM1P11229 460 aaPredicted RBP10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 GDF10P55107 478 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 NLRP11P59045 1033 aaKnown RBP10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 PDIA2Q13087 525 aaKnown RBP10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 MAMLD1Q13495 774 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 MOGSQ13724 837 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 TFDP1Q14186 410 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 CLUL1Q15846 466 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 CYP4A22Q5TCH4 519 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 RNF43Q68DV7 783 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 APBB1IPQ7Z5R6 666 aaPredicted RBP10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 MASTLQ96GX5 879 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 WNK4Q96J92 1243 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 RANBP17Q9H2T7 1088 aaKnown RBP10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 KANSL3Q9P2N6 904 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 TJP2Q9UDY2 1190 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 STK24Q9Y6E0 443 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 CEP350Q5VT06 3117 aa10.96□□□□□ -0.65
CDC42SE1-207ENST00000540998 TCRBV7S3A2A0A539 114 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 RAD17O75943 681 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 PROSCO94903 275 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 MMP10P09238 476 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 ATP5DP30049 168 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 GPC3P51654 580 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 OGDHQ02218 1023 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 ALCAMQ13740 583 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 TCEAL1Q15170 157 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 TDRD10Q5VZ19 366 aaKnown RBP10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 SLCO2A1Q92959 643 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 LGALS13Q9UHV8 139 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 TMX2Q9Y320 296 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 MRPL11Q9Y3B7 192 aaKnown RBP10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF831Q5JPB2 1677 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 ANKRD31Q8N7Z5 1873 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF536O15090 1300 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 YDJCA8MPS7 323 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF862O60290 1169 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 KRT1P04264 644 aa10.96□□□□□ -0.66
CDC42SE1-207ENST00000540998 TPBGLP0DKB5 382 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms