RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 CHST13Q8NET6 341 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 DBF4BQ8NFT6 615 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 SPPL3Q8TCT6 385 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 SECISBP2LQ93073 1101 aaKnown RBP4.58□□□□□ -1.68
TSG101-205ENST00000540555 TSR2Q969E8 191 aaKnown RBP4.58□□□□□ -1.68
TSG101-205ENST00000540555 OSBP2Q969R2 916 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 ZNF689Q96CS4 500 aaPredicted RBP4.58□□□□□ -1.68
TSG101-205ENST00000540555 IL17RAQ96F46 866 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 NECTIN4Q96NY8 510 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 NEK1Q96PY6 1258 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 SH2D4AQ9H788 454 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 VTA1Q9NP79 307 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 GPR108Q9NPR9 543 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 PDGFCQ9NRA1 345 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 FBXO28Q9NVF7 368 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 AATFQ9NY61 560 aaKnown RBP eCLIP4.58□□□□□ -1.68
TSG101-205ENST00000540555 FBXO4Q9UKT5 387 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 DUSP12Q9UNI6 340 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 SMG5Q9UPR3 1016 aaKnown RBP4.58□□□□□ -1.68
TSG101-205ENST00000540555 RNF114Q9Y508 228 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 SCN5AQ14524 2016 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 AKAP13Q12802 2813 aa4.58□□□□□ -1.68
TSG101-205ENST00000540555 RELNP78509 3460 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 ADGRA3Q8IWK6 1321 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 FANCIQ9NVI1 1328 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 SCN10AQ9Y5Y9 1956 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 MYH2Q9UKX2 1941 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 LOC102724159A0A0B4J2E5 919 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 NRDCO43847 1150 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 DLX3O60479 287 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 FOXD2O60548 495 aaPredicted RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 ITGB1P05556 798 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 PLS3P13797 630 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 IL15P40933 162 aaPredicted RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 AFMP43652 599 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 SEPHS1P49903 392 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 EXOSC9Q06265 439 aaKnown RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 IFRD2Q12894 506 aaPredicted RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 KIR3DS1Q14943 382 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 PWP2Q15269 919 aaKnown RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 HSF5Q4G112 596 aaPredicted RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 FAM47CQ5HY64 1035 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 ANKRD54Q6NXT1 300 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 CYP2R1Q6VVX0 501 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 CEP128Q6ZU80 1094 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 NOL8Q76FK4 1167 aaKnown RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 CERS3Q8IU89 383 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 CCDC103Q8IW40 242 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 SPICE1Q8N0Z3 855 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 SPATA5Q8NB90 893 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 TMEM145Q8NBT3 493 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 RIN2Q8WYP3 895 aaPredicted RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 CCDC140Q96MF4 163 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 JMJD8Q96S16 334 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 HNRNPABQ99729 332 aaKnown RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 PLCD4Q9BRC7 762 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 AARSD1Q9BTE6 412 aaKnown RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 IER2Q9BTL4 223 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 KANSL2Q9H9L4 492 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 WNT16Q9UBV4 365 aa4.57□□□□□ -1.68
TSG101-205ENST00000540555 SAP30BPQ9UHR5 308 aaKnown RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 TMEFF2Q9UIK5 374 aaPredicted RBP4.57□□□□□ -1.68
TSG101-205ENST00000540555 TRAV20A0A0B4J274 112 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 NKRFO15226 690 aaKnown RBP eCLIP4.56□□□□□ -1.68
TSG101-205ENST00000540555 PRODHO43272 600 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 PPP1R11O60927 126 aaPredicted RBP4.56□□□□□ -1.68
TSG101-205ENST00000540555 CPP00450 1065 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 ASGR2P07307 311 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 SNRPB2P08579 225 aaKnown RBP4.56□□□□□ -1.68
TSG101-205ENST00000540555 MYL3P08590 195 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 PABPC1P11940 636 aaKnown RBP4.56□□□□□ -1.68
TSG101-205ENST00000540555 ECI1P42126 302 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 PLCD1P51178 756 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 RBM10P98175 930 aaKnown RBP4.56□□□□□ -1.68
TSG101-205ENST00000540555 CNTN2Q02246 1040 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 UBE3AQ05086 875 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 ITIH3Q06033 890 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 TDGQ13569 410 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 MVPQ14764 893 aaKnown RBP4.56□□□□□ -1.68
TSG101-205ENST00000540555 TESK1Q15569 626 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 LONRF2Q1L5Z9 754 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 INF2Q27J81 1249 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 BRDTQ58F21 947 aaPredicted RBP4.56□□□□□ -1.68
TSG101-205ENST00000540555 ZNF618Q5T7W0 954 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 HLA-DQA1Q5Y7H0 255 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 MBLAC2Q68D91 279 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 NLRX1Q86UT6 975 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 FBXO16Q8IX29 292 aaPredicted RBP4.56□□□□□ -1.68
TSG101-205ENST00000540555 LILRA2Q8N149 483 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 ANKRD35Q8N283 1001 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 NAT16Q8N8M0 369 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 ABHD4Q8TB40 342 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 KAT2BQ92831 832 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 MRFAP1L1Q96HT8 127 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 NOL10Q9BSC4 688 aaKnown RBP4.56□□□□□ -1.68
TSG101-205ENST00000540555 IFIH1Q9BYX4 1025 aaKnown RBP4.56□□□□□ -1.68
TSG101-205ENST00000540555 ADAM7Q9H2U9 754 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 POMKQ9H5K3 350 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 TLE6Q9H808 572 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 SLC38A10Q9HBR0 1119 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms