RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 HELQQ8TDG4 1101 aa11.65□□□□□ -0.55
PBX1-212ENST00000540236 MRPS26Q9BYN8 205 aaKnown RBP11.65□□□□□ -0.55
PBX1-212ENST00000540236 PLGRKTQ9HBL7 147 aa11.65□□□□□ -0.55
PBX1-212ENST00000540236 COQ3Q9NZJ6 369 aa11.65□□□□□ -0.55
PBX1-212ENST00000540236 EPS15L1Q9UBC2 864 aa11.65□□□□□ -0.55
PBX1-212ENST00000540236 ABCC3O15438 1527 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 GOLGA8JA6NMD2 632 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 J3QRK9 145 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 TRMUO75648 421 aaKnown RBP11.64□□□□□ -0.55
PBX1-212ENST00000540236 ADRA1DP25100 572 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 ALDH1A3P47895 512 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 EVA1CP58658 441 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 EFTUD2Q15029 972 aaKnown RBP eCLIP11.64□□□□□ -0.55
PBX1-212ENST00000540236 MAPK6Q16659 721 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 FAM186BQ8IYM0 893 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 ZNF564Q8TBZ8 553 aaPredicted RBP11.64□□□□□ -0.55
PBX1-212ENST00000540236 IGDCC4Q8TDY8 1250 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 FBXL8Q96CD0 374 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 ARHGEF10O15013 1369 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 SORBS3O60504 671 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 CNOT3O75175 753 aaKnown RBP11.64□□□□□ -0.55
PBX1-212ENST00000540236 NUDT2P50583 147 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 RAD23AP54725 363 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 TAF12Q16514 161 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 RINT1Q6NUQ1 792 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 TPH2Q8IWU9 490 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 HEPHQ9BQS7 1158 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 ANAPC7Q9UJX3 599 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 PLAGL2Q9UPG8 496 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 MTO1Q9Y2Z2 717 aaKnown RBP11.64□□□□□ -0.55
PBX1-212ENST00000540236 STAT3P40763 770 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 USP17L6PQ6QN14 398 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 IL1RL2Q9HB29 575 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 LRRC42Q9Y546 428 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 TRIM49P0CI25 452 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 TRIM49CP0CI26 452 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 TCEA1P23193 301 aaKnown RBP11.64□□□□□ -0.55
PBX1-212ENST00000540236 TFAP4Q01664 338 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 WDR72Q3MJ13 1102 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 ATG16L1Q676U5 607 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 ELMSAN1Q6PJG2 1045 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 UBE2Q1Q7Z7E8 422 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 HTRA1Q92743 480 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
PBX1-212ENST00000540236 NEU2Q9Y3R4 380 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 ADGRB2O60241 1585 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 SAC3D1A6NKF1 404 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 USP17L21D6R901 530 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 RNASEH1O60930 286 aaKnown RBP11.64□□□□□ -0.55
PBX1-212ENST00000540236 ADSLP30566 484 aaPredicted RBP11.64□□□□□ -0.55
PBX1-212ENST00000540236 MRPS22P82650 360 aaKnown RBP11.64□□□□□ -0.55
PBX1-212ENST00000540236 CAVIN4Q5BKX8 364 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 RSBN1LQ6PCB5 846 aaPredicted RBP11.64□□□□□ -0.55
PBX1-212ENST00000540236 COA7Q96BR5 231 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 C10orf88Q9H8K7 445 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 KCNQ5Q9NR82 932 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 AIPL1Q9NZN9 384 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 SEPT10Q9P0V9 454 aa11.64□□□□□ -0.55
PBX1-212ENST00000540236 NRXN1Q9ULB1 1477 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 FLT4P35916 1363 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 A0A1W2PPM1 405 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 CCRL2O00421 344 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 GSTT2P0CG29 244 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 GSTT2BP0CG30 244 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 FLOT2Q14254 428 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 CENPUQ71F23 418 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 ZNF317Q96PQ6 595 aaPredicted RBP11.63□□□□□ -0.55
PBX1-212ENST00000540236 RNF26Q9BY78 433 aaPredicted RBP11.63□□□□□ -0.55
PBX1-212ENST00000540236 PARVBQ9HBI1 364 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 DDX25Q9UHL0 483 aaKnown RBP11.63□□□□□ -0.55
PBX1-212ENST00000540236 SAMD9LQ8IVG5 1584 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 CPDO75976 1380 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 IFI30P13284 250 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 LSM3P62310 102 aaKnown RBP11.63□□□□□ -0.55
PBX1-212ENST00000540236 MEA1Q16626 185 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 RGS21Q2M5E4 152 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 USH1GQ495M9 461 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 RFX6Q8HWS3 928 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 DUSP9Q99956 384 aaKnown RBP11.63□□□□□ -0.55
PBX1-212ENST00000540236 KIAA1586Q9HCI6 787 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 NR2E1Q9Y466 385 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 CTDP1Q9Y5B0 961 aaPredicted RBP11.63□□□□□ -0.55
PBX1-212ENST00000540236 CDC42BPAQ5VT25 1732 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 MROH7Q68CQ1 1323 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 STK36Q9NRP7 1315 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 ARHGEF37A1IGU5 675 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 GAS7O60861 476 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 KRT76Q01546 638 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 SPIDRQ14159 915 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 MIIPQ5JXC2 388 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 CCSAPQ6IQ19 270 aaPredicted RBP11.63□□□□□ -0.55
PBX1-212ENST00000540236 NEK8Q86SG6 692 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 SRBD1Q8N5C6 995 aaKnown RBP11.63□□□□□ -0.55
PBX1-212ENST00000540236 DQX1Q8TE96 717 aaKnown RBP11.63□□□□□ -0.55
PBX1-212ENST00000540236 BRIP1Q9BX63 1249 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 KRT82Q9NSB4 513 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 NINJ2Q9NZG7 142 aa11.63□□□□□ -0.55
PBX1-212ENST00000540236 TAGLN3Q9UI15 199 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms