RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 YWHAEP62258 255 aaKnown RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 GTF2BQ00403 316 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 MAP1SQ66K74 1059 aaPredicted RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 SESTD1Q86VW0 696 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 MAP7D3Q8IWC1 876 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 CFAP36Q96G28 342 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 APEX2Q9UBZ4 518 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 CFAP69A5D8W1 941 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 PABPN1LA6NDY0 278 aaKnown RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 PI4K2BG5E9Z4 385 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 CAPN9O14815 690 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 ATMINO43313 823 aaPredicted RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 FAM107AO95990 144 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 SRGAP2CP0DJJ0 459 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 HSD17B3P37058 310 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 FSTL1Q12841 308 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 NAB2Q15742 525 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 SYCP2LQ5T4T6 812 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 CBWD2Q8IUF1 395 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 THNSL1Q8IYQ7 743 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 CASKIN2Q8WXE0 1202 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 CCT6BQ92526 530 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 ZNF668Q96K58 619 aaPredicted RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 SENP7Q9BQF6 1050 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 CXorf56Q9H5V9 222 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 NGRNQ9NPE2 291 aaKnown RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 KLHL11Q9NVR0 708 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 PCSK1NQ9UHG2 260 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 CASQ2O14958 399 aaPredicted RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 CLDN3O15551 220 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 TRPA1O75762 1119 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 P4HA1P13674 534 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 UBA1P22314 1058 aaKnown RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 SNX16P57768 344 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 CCNA1P78396 465 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 TMPRSS15P98073 1019 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 KRT17Q04695 432 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 GPS1Q13098 491 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 MYBPC2Q14324 1141 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 PTGISQ16647 500 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 KYNUQ16719 465 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 KCTD19Q17RG1 926 aaPredicted RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 LY6KQ17RY6 165 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 PAPD7Q5XG87 772 aaKnown RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 HGSNATQ68CP4 663 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 ABHD15Q6UXT9 468 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 SEPT1Q8WYJ6 367 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 XPO6Q96QU8 1125 aaKnown RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 C17orf75Q9HAS0 396 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 PFDN4Q9NQP4 134 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 TELO2Q9Y4R8 837 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 DOCK1Q14185 1865 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 CPP00450 1065 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 NCF2P19878 526 aaPredicted RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 DLG4P78352 724 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 IFRD2Q12894 506 aaPredicted RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 MAP7Q14244 749 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 NFIL3Q16649 462 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 PCGF5Q86SE9 256 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 SLC9A9Q8IVB4 645 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 ZBED8Q8IZ13 594 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 TMEM161BQ8NDZ6 487 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 MYCBPAPQ8TBZ2 947 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 STK33Q9BYT3 514 aa10.57□□□□□ -0.72
TRAF1-202ENST00000540010 DIS3Q9Y2L1 958 aaKnown RBP10.57□□□□□ -0.72
TRAF1-202ENST00000540010 SSC5DA1L4H1 1573 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 IGSF9BQ9UPX0 1349 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 FAM187AA6NFU0 413 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 CFLARO15519 480 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 GMNNO75496 209 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 TCF7P36402 384 aaPredicted RBP10.56□□□□□ -0.72
TRAF1-202ENST00000540010 SP2Q02086 613 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 RNASELQ05823 741 aaKnown RBP10.56□□□□□ -0.72
TRAF1-202ENST00000540010 KIF22Q14807 665 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 RPS6KA2Q15349 733 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 PPP6R3Q5H9R7 873 aaPredicted RBP10.56□□□□□ -0.72
TRAF1-202ENST00000540010 ZNF571Q7Z3V5 609 aaPredicted RBP10.56□□□□□ -0.72
TRAF1-202ENST00000540010 ERICH1Q86X53 443 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 HSPH1Q92598 858 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 CDKL2Q92772 493 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 APOL6Q9BWW8 343 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 TRIM55Q9BYV6 548 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 FGFR1OP2Q9NVK5 253 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 DMAC2Q9NW81 257 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 FIS1Q9Y3D6 152 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 ALG6Q9Y672 507 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 ANKRD63C9JTQ0 380 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 GIPC1O14908 333 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 TLR3O15455 904 aaKnown RBP10.56□□□□□ -0.72
TRAF1-202ENST00000540010 CYP2C8P10632 490 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 RAD23BP54727 409 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 NCKAP1LP55160 1127 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 OR6B2Q6IFH4 312 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 KIRREL3Q8IZU9 778 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 SPATA33Q96N06 139 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 TTC1Q99614 292 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 AGPAT1Q99943 283 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 NAGPAQ9UK23 515 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 SOWAHBA6NEL2 793 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms