RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 NUP85Q9BW27 656 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 PLVAPQ9BX97 442 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 TRIM6Q9C030 488 aaPredicted RBP18.31■□□□□ 0.52
LTBR-207ENST00000539925 PCDHGC3Q9UN70 934 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 COG5Q9UP83 839 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 ALG6Q9Y672 507 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 MGAMO43451 1857 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 CSDE1O75534 798 aaKnown RBP18.3■□□□□ 0.52
LTBR-207ENST00000539925 ECM2O94769 699 aaPredicted RBP18.3■□□□□ 0.52
LTBR-207ENST00000539925 HSPA6P17066 643 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 CTGFP29279 349 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 NOMO3P69849 1222 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 BEX3Q00994 111 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 SP3Q02447 781 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 MYO1EQ12965 1108 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 SNX17Q15036 470 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 CC2D1AQ6P1N0 951 aaPredicted RBP18.3■□□□□ 0.52
LTBR-207ENST00000539925 RUFY4Q6ZNE9 571 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 DNAAF5Q86Y56 855 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 TMEM35BQ8NCS4 154 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 ZNF606Q8WXB4 792 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 TRIB2Q92519 343 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 LENG1Q96BZ8 264 aaPredicted RBP18.3■□□□□ 0.52
LTBR-207ENST00000539925 OSMRQ99650 979 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 DNAI2Q9GZS0 605 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 ACP6Q9NPH0 428 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 SIX4Q9UIU6 781 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 UMODL1Q5DID0 1318 aa18.3■□□□□ 0.52
LTBR-207ENST00000539925 CCDC66A2RUB6 948 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 TREHO43280 583 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 CEP104O60308 925 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 NPTXRO95502 500 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 GNRH1P01148 92 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 ITGB3P05106 788 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 CALB1P05937 261 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 NAA35Q5VZE5 725 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 CYP4F22Q6NT55 531 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 MON1BQ7L1V2 547 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 RPAINQ86UA6 219 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 TMEM192Q8IY95 271 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 DPP3Q9NY33 737 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 KIAA1257Q9ULG3 409 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 PACSIN2Q9UNF0 486 aaPredicted RBP18.29■□□□□ 0.52
LTBR-207ENST00000539925 GINS2Q9Y248 185 aa18.29■□□□□ 0.52
LTBR-207ENST00000539925 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
LTBR-207ENST00000539925 CTNNA2P26232 953 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 CDH5P33151 784 aaPredicted RBP18.28■□□□□ 0.52
LTBR-207ENST00000539925 TAP1Q03518 808 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 C2orf54Q08AI8 447 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 DEFB115Q30KQ5 88 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 WDR72Q3MJ13 1102 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 C8orf74Q6P047 294 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 SESTD1Q86VW0 696 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 TRPV1Q8NER1 839 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 BEST2Q8NFU1 509 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 KIF12Q96FN5 646 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 HPDLQ96IR7 371 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 SNX27Q96L92 541 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 ADAM22Q9P0K1 906 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 GTF2IRD1Q9UHL9 959 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 CASP8AP2Q9UKL3 1982 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 DDX3YO15523 660 aaKnown RBP18.28■□□□□ 0.52
LTBR-207ENST00000539925 ZRANB2O95218 330 aaKnown RBP eCLIP18.28■□□□□ 0.525e-8■■■■■ 51.3
LTBR-207ENST00000539925 TBC1D8O95759 1140 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 CST5P28325 142 aaPredicted RBP18.28■□□□□ 0.52
LTBR-207ENST00000539925 LRRC52Q8N7C0 313 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 CXorf38Q8TB03 319 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 CYFIP2Q96F07 1278 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 CELF4Q9BZC1 486 aaKnown RBP18.28■□□□□ 0.52
LTBR-207ENST00000539925 LHX5Q9H2C1 402 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 CNTN3Q9P232 1028 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 NXF1Q9UBU9 619 aaKnown RBP18.28■□□□□ 0.52
LTBR-207ENST00000539925 TMEM59LQ9UK28 342 aa18.28■□□□□ 0.52
LTBR-207ENST00000539925 ANK1P16157 1881 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 GOLGA6L10A0A0M3HER8 536 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 MYO1FO00160 1098 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 CD4P01730 458 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 POLR2BP30876 1174 aaKnown RBP18.27■□□□□ 0.52
LTBR-207ENST00000539925 DNA2P51530 1060 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 PRKCZQ05513 592 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 MESDQ14696 234 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 STILQ15468 1287 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 PCSK9Q8NBP7 692 aaKnown RBP18.27■□□□□ 0.52
LTBR-207ENST00000539925 ELMO3Q96BJ8 720 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 CAPNS2Q96L46 248 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 ZIC5Q96T25 663 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 PNKPQ96T60 521 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 ZSWIM1Q9BR11 485 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 PARVAQ9NVD7 372 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 STRIP2Q9ULQ0 834 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 UBQLN1Q9UMX0 589 aaKnown RBP18.27■□□□□ 0.52
LTBR-207ENST00000539925 GABRQQ9UN88 632 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 AGAP1Q9UPQ3 857 aa18.27■□□□□ 0.52
LTBR-207ENST00000539925 A0A0U1RQG5 324 aaPredicted RBP18.26■□□□□ 0.51
LTBR-207ENST00000539925 SPOPO43791 374 aa18.26■□□□□ 0.51
LTBR-207ENST00000539925 CAPN15O75808 1086 aa18.26■□□□□ 0.51
LTBR-207ENST00000539925 CABYRO75952 493 aa18.26■□□□□ 0.51
LTBR-207ENST00000539925 CD58P19256 250 aa18.26■□□□□ 0.51
LTBR-207ENST00000539925 TNFRSF8P28908 595 aa18.26■□□□□ 0.51
LTBR-207ENST00000539925 TMEM62Q0P6H9 643 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms