RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ZNF446Q9NWS9 450 aa23.97■■□□□ 1.43
HOMER3-204ENST00000539827 AGAP1Q9UPQ3 857 aa23.97■■□□□ 1.43
HOMER3-204ENST00000539827 HES2Q9Y543 173 aa23.97■■□□□ 1.43
HOMER3-204ENST00000539827 ALG6Q9Y672 507 aa23.97■■□□□ 1.43
HOMER3-204ENST00000539827 SEPT4O43236 478 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 SEC31AO94979 1220 aaKnown RBP23.96■■□□□ 1.43
HOMER3-204ENST00000539827 RARBP10826 455 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 ELNP15502 786 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 BRD2P25440 801 aaKnown RBP23.96■■□□□ 1.43
HOMER3-204ENST00000539827 CCND3P30281 292 aaPredicted RBP23.96■■□□□ 1.43
HOMER3-204ENST00000539827 WDR72Q3MJ13 1102 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 C2CD6Q53TS8 623 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 APBB1IPQ7Z5R6 666 aaPredicted RBP23.96■■□□□ 1.43
HOMER3-204ENST00000539827 ZNF606Q8WXB4 792 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 SPC25Q9HBM1 224 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 CITO14578 2027 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 DDX3YO15523 660 aaKnown RBP23.96■■□□□ 1.43
HOMER3-204ENST00000539827 MTA2O94776 668 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 MYCNP04198 464 aaPredicted RBP23.96■■□□□ 1.43
HOMER3-204ENST00000539827 NSFP46459 744 aaKnown RBP23.96■■□□□ 1.43
HOMER3-204ENST00000539827 CDH8P55286 799 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 ITIH3Q06033 890 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 SELENOOQ9BVL4 669 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 APOL6Q9BWW8 343 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 SDCBP2Q9H190 292 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 RBM12Q9NTZ6 932 aaKnown RBP23.96■■□□□ 1.43
HOMER3-204ENST00000539827 DPP3Q9NY33 737 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 RAB21Q9UL25 225 aa23.96■■□□□ 1.43
HOMER3-204ENST00000539827 PIN4Q9Y237 131 aaKnown RBP23.96■■□□□ 1.43
HOMER3-204ENST00000539827 CES2O00748 559 aa23.95■■□□□ 1.42
HOMER3-204ENST00000539827 NOMO3P69849 1222 aa23.95■■□□□ 1.42
HOMER3-204ENST00000539827 CENPCQ03188 943 aa23.95■■□□□ 1.42
HOMER3-204ENST00000539827 C11orf63Q6NUN7 778 aa23.95■■□□□ 1.42
HOMER3-204ENST00000539827 LLGL2Q6P1M3 1020 aa23.95■■□□□ 1.42
HOMER3-204ENST00000539827 TMCO3Q6UWJ1 677 aa23.95■■□□□ 1.42
HOMER3-204ENST00000539827 TRIM72Q6ZMU5 477 aa23.95■■□□□ 1.42
HOMER3-204ENST00000539827 C2CD2Q9Y426 696 aa23.95■■□□□ 1.42
HOMER3-204ENST00000539827 CRYBB1P53674 252 aaPredicted RBP23.94■■□□□ 1.42
HOMER3-204ENST00000539827 VSNL1P62760 191 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 MRPS25P82663 173 aaKnown RBP23.94■■□□□ 1.42
HOMER3-204ENST00000539827 NME8Q8N427 588 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 CALR3Q96L12 384 aaKnown RBP23.94■■□□□ 1.42
HOMER3-204ENST00000539827 ZSWIM1Q9BR11 485 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 NXF3Q9H4D5 531 aaKnown RBP23.94■■□□□ 1.42
HOMER3-204ENST00000539827 SMYD3Q9H7B4 428 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 YWHAEP62258 255 aaKnown RBP23.94■■□□□ 1.42
HOMER3-204ENST00000539827 PCBP1Q15365 356 aaKnown RBP eCLIP23.94■■□□□ 1.42
HOMER3-204ENST00000539827 FAM47CQ5HY64 1035 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 CPNE8Q86YQ8 564 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 CD302Q8IX05 232 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 HPDLQ96IR7 371 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 C11orf70Q9BRQ4 267 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 BCO2Q9BYV7 579 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 TRIM6Q9C030 488 aaPredicted RBP23.94■■□□□ 1.42
HOMER3-204ENST00000539827 RNF19AQ9NV58 838 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 UVRAGQ9P2Y5 699 aa23.94■■□□□ 1.42
HOMER3-204ENST00000539827 PRKAR2AP13861 404 aaKnown RBP23.93■■□□□ 1.42
HOMER3-204ENST00000539827 COMTP21964 271 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 RRM1P23921 792 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 AXLP30530 894 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 ATICP31939 592 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 BRD3Q15059 726 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 GDF6Q6KF10 455 aaPredicted RBP23.93■■□□□ 1.42
HOMER3-204ENST00000539827 CC2D1AQ6P1N0 951 aaPredicted RBP23.93■■□□□ 1.42
HOMER3-204ENST00000539827 MON1BQ7L1V2 547 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 SNX27Q96L92 541 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 ZMAT2Q96NC0 199 aaKnown RBP23.93■■□□□ 1.42
HOMER3-204ENST00000539827 LRRC1Q9BTT6 524 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 XPNPEP3Q9NQH7 507 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 GTF2IRD1Q9UHL9 959 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 ITGA11Q9UKX5 1188 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 TRIP11Q15643 1979 aa23.93■■□□□ 1.42
HOMER3-204ENST00000539827 ADAMTS4O75173 837 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 TRPA1O75762 1119 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 YARSP54577 528 aaKnown RBP23.92■■□□□ 1.42
HOMER3-204ENST00000539827 RBP5P82980 135 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 USP38Q8NB14 1042 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 TFAP2BQ92481 460 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 CELF4Q9BZC1 486 aaKnown RBP23.92■■□□□ 1.42
HOMER3-204ENST00000539827 AKAP5P24588 427 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 ORC1Q13415 861 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 NT5DC4Q86YG4 428 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 CD99L2Q8TCZ2 262 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 TRIM11Q96F44 468 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 HINFPQ9BQA5 517 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 PLEKHA5Q9HAU0 1116 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 ADAM22Q9P0K1 906 aa23.92■■□□□ 1.42
HOMER3-204ENST00000539827 ZMYND10O75800 440 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 MYBL1P10243 752 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 GLRA4Q5JXX5 417 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 UBXN11Q5T124 520 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 TAF2Q6P1X5 1199 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 MMS22LQ6ZRQ5 1243 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 ACTRT1Q8TDG2 376 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 AVENQ9NQS1 362 aaPredicted RBP23.91■■□□□ 1.42
HOMER3-204ENST00000539827 SCN10AQ9Y5Y9 1956 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 CCDC151A5D8V7 595 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 RECQL4O94761 1208 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 CD19P15391 556 aa23.91■■□□□ 1.42
HOMER3-204ENST00000539827 MRPS6P82932 125 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms