RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 UGT3A1Q6NUS8 523 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 MMS22LQ6ZRQ5 1243 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 POLD4Q9HCU8 107 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 ARHGEF38Q9NXL2 777 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 AFF4Q9UHB7 1163 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 SNX9Q9Y5X1 595 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 SPATA31A1Q5TZJ5 1347 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 ANGPT2O15123 496 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 FGFR4P22455 802 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 NKX1-1Q15270 411 aaPredicted RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 PARP9Q8IXQ6 854 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 STX19Q8N4C7 294 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 TTC30BQ8N4P2 665 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 ZNF555Q8NEP9 628 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 MRPL1Q9BYD6 325 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 GOLPH3Q9H4A6 298 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 WARS2Q9UGM6 360 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 CNTNAP4Q9C0A0 1308 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 EEF2KO00418 725 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 MYL2P10916 166 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 GPD1P21695 349 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 KCNA4P22459 653 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 MDH1P40925 334 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 ALDH1A3P47895 512 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 NLRP11P59045 1033 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 GRIN1Q05586 938 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 IL31Q6EBC2 164 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 ACAD10Q6JQN1 1059 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 BARGINQ6ZT62 677 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 PDLIM2Q96JY6 352 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 LRRC1Q9BTT6 524 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 TRPC7Q9HCX4 862 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 MYOZ2Q9NPC6 264 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 FOXN1O15353 648 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 KCNQ2O43526 872 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 RARBP10826 455 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 CHRNA5P30532 468 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SPRP35270 261 aaPredicted RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 CCDC15Q0P6D6 951 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SYTL3Q4VX76 610 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SPDYAQ5MJ70 313 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 C16orf87Q6PH81 154 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 GLB1LQ6UWU2 654 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SPATA21Q7Z572 469 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 DDX53Q86TM3 631 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 PTPRN2Q92932 1015 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 RANBP17Q9H2T7 1088 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 POLBP06746 335 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 OCM2P0CE71 109 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 OCMP0CE72 109 aaPredicted RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 CDH2P19022 906 aaPredicted RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 GTF2H1P32780 548 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 PPP4CP60510 307 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 EN1Q05925 392 aaPredicted RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 STX3Q13277 289 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 LINC00523Q86TU6 105 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 DAGLBQ8NCG7 672 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SGSM3Q96HU1 749 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 MUC3BQ9H195 1237 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SPON1Q9HCB6 807 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 MLXIPLQ9NP71 852 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SH3BP1Q9Y3L3 701 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SLC30A1Q9Y6M5 507 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 PRRG1O14668 218 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 GRIN3BO60391 1043 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 CYP2C8P10632 490 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 CETPP11597 493 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 KCNA2P16389 499 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 PGM1P36871 562 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 CUL3Q13618 768 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SETD3Q86TU7 594 aaPredicted RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 DCP1BQ8IZD4 617 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 TMCO5AQ8N6Q1 288 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 ELMO2Q96JJ3 720 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SPATA16Q9BXB7 569 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 CCDC90BQ9GZT6 254 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 ETNK1Q9HBU6 452 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 H2AFYO75367 372 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SYF2O95926 243 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 HLA-DRAP01903 254 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 RPLP2P05387 115 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SERPINB10P48595 397 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 PTK6Q13882 451 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SCFD2Q8WU76 684 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 AGAP3Q96P47 875 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 LBHD1Q9BQE6 289 aaPredicted RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 OSBPL8Q9BZF1 889 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 UNC45AQ9H3U1 944 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 PKD2L2Q9NZM6 624 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 AFDNP55196 1824 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 ZNF185O15231 689 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 TMEM253P0C7T8 217 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 HSPA1AP0DMV8 641 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 HSPA1BP0DMV9 641 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 RASA1P20936 1047 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 HARS2P49590 506 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SESN2P58004 480 aaPredicted RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 ARHGEF7Q14155 803 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 POTEAQ6S8J7 498 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms