RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 DNAH12Q6ZR08 3092 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.43□□□□□ -0.58
LEMD3-202ENST00000539442 ARHGAP6O43182 974 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 OFD1O75665 1012 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 BAIAP3O94812 1187 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 CLSTN1O94985 981 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 SKILP12757 684 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 CSF2RAP15509 400 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 PAX3P23760 479 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 ITGB8P26012 769 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 RPL9P32969 192 aaKnown RBP11.43□□□□□ -0.58
LEMD3-202ENST00000539442 KCNJ6P48051 423 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 SCNN1GP51170 649 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 GUCY2FP51841 1108 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 YWHAEP62258 255 aaKnown RBP11.43□□□□□ -0.58
LEMD3-202ENST00000539442 NAB2Q15742 525 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 ASIC2Q16515 512 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 ARHGAP44Q17R89 818 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 TCTN1Q2MV58 587 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 C9orf57Q5W0N0 161 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 SPOPLQ6IQ16 392 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 CYP26C1Q6V0L0 522 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 URGCPQ8TCY9 931 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 TATDN2Q93075 761 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 VWCEQ96DN2 955 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 HPDLQ96IR7 371 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 KREMEN1Q96MU8 473 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 UROC1Q96N76 676 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 GPR88Q9GZN0 384 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 KCNF1Q9H3M0 494 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 LRFN2Q9ULH4 789 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 NUB1Q9Y5A7 615 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 PCDHB7Q9Y5E2 793 aa11.43□□□□□ -0.58
LEMD3-202ENST00000539442 BZW2Q9Y6E2 419 aaKnown RBP11.43□□□□□ -0.58
LEMD3-202ENST00000539442 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.43□□□□□ -0.58
LEMD3-202ENST00000539442 SSU72P8A0A1W2PR75 194 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 PIRO00625 290 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 SERPING1P05155 500 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 ANXA13P27216 316 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 PRKCIP41743 596 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 TAF6P49848 677 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 TNNC1P63316 161 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 SOX4Q06945 474 aaPredicted RBP11.42□□□□□ -0.58
LEMD3-202ENST00000539442 PPIGQ13427 754 aaKnown RBP eCLIP11.42□□□□□ -0.58
LEMD3-202ENST00000539442 TUSC3Q13454 348 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 WDR72Q3MJ13 1102 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 SV2CQ496J9 727 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 NOMO2Q5JPE7 1267 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 CLLU1OSQ5K130 101 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 E4F1Q66K89 784 aaPredicted RBP11.42□□□□□ -0.58
LEMD3-202ENST00000539442 WDR59Q6PJI9 974 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 ABI1Q8IZP0 508 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 CRIPAKQ8N1N5 446 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 TTC39CQ8N584 583 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 KAT5Q92993 513 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 DDX27Q96GQ7 796 aaKnown RBP11.42□□□□□ -0.58
LEMD3-202ENST00000539442 ABHD8Q96I13 439 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 MRPL9Q9BYD2 267 aaKnown RBP11.42□□□□□ -0.58
LEMD3-202ENST00000539442 BCO2Q9BYV7 579 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 CYP3A43Q9HB55 503 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 IL23AQ9NPF7 189 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 RNF19AQ9NV58 838 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 MIOSQ9NXC5 875 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 CNTN6Q9UQ52 1028 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 INPP5FQ9Y2H2 1132 aa11.42□□□□□ -0.58
LEMD3-202ENST00000539442 PDCD11Q14690 1871 aaKnown RBP11.42□□□□□ -0.58
LEMD3-202ENST00000539442 RBAK-RBAKDNI3L0D1 243 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 FOXN3O00409 490 aaPredicted RBP11.41□□□□□ -0.58
LEMD3-202ENST00000539442 EVI5O60447 810 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 GFPT2O94808 682 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 AMHP03971 560 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 FGFR1P11362 822 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 ACO1P21399 889 aaKnown RBP11.41□□□□□ -0.58
LEMD3-202ENST00000539442 IBSPP21815 317 aaPredicted RBP11.41□□□□□ -0.58
LEMD3-202ENST00000539442 ASPAP45381 313 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 AFF1P51825 1210 aaKnown RBP11.41□□□□□ -0.58
LEMD3-202ENST00000539442 FPGSQ05932 587 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 KLHL30Q0D2K2 578 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 SCARA3Q6AZY7 606 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 IRF2BP2Q7Z5L9 587 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 FAM71AQ8IYT1 594 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 CCDC170Q8IYT3 715 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 UBR7Q8N806 425 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 ZNF830Q96NB3 372 aaPredicted RBP11.41□□□□□ -0.58
LEMD3-202ENST00000539442 ARID3AQ99856 593 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 GOLGA2P5Q9HBQ8 144 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.41□□□□□ -0.58
LEMD3-202ENST00000539442 GDAP2Q9NXN4 497 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 ZKSCAN5Q9Y2L8 839 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 SCN5AQ14524 2016 aa11.41□□□□□ -0.58
LEMD3-202ENST00000539442 KPNA7A9QM74 516 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 PODXLO00592 558 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 PPEF2O14830 753 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 POMCP01189 267 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 FAM163BP0C2L3 166 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 CYLC1P35663 651 aaPredicted RBP11.4□□□□□ -0.58
LEMD3-202ENST00000539442 BPIFB4P59827 614 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 DSC1Q08554 894 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 TDRD12Q587J7 1177 aaKnown RBP11.4□□□□□ -0.58
LEMD3-202ENST00000539442 HGSNATQ68CP4 663 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms