RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PCDHB8Q9UN66 801 aa17.01■□□□□ 0.31
RPAIN-206ENST00000539417 TRAPPC3O43617 180 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 TBC1D4O60343 1298 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 KRT19P08727 400 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 TMEM191BP0C7N4 346 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 TNNI1P19237 187 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 BMS1Q14692 1282 aaKnown RBP17■□□□□ 0.31
RPAIN-206ENST00000539417 DSTYKQ6XUX3 929 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 TMEM184AQ6ZMB5 413 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 TRAPPC11Q7Z392 1133 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 CACTINQ8WUQ7 758 aaKnown RBP17■□□□□ 0.31
RPAIN-206ENST00000539417 MED15Q96RN5 788 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 NUP62CLQ9H1M0 184 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 FNIP2Q9P278 1114 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 MTRRQ9UBK8 725 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 CTNND2Q9UQB3 1225 aa17■□□□□ 0.31
RPAIN-206ENST00000539417 GRXCR2A6NFK2 248 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 TGM5O43548 720 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 NCK2O43639 380 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 TRIM49P0CI25 452 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 TRIM49CP0CI26 452 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 CCNE1P24864 410 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 OR1D2P34982 312 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 STX17P56962 302 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 SURF1Q15526 300 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 DUOXA2Q1HG44 320 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 EDRF1Q3B7T1 1238 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 LEXMQ3ZCV2 418 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 ANKRD54Q6NXT1 300 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 LILRA6Q6PI73 481 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 ZC3H3Q8IXZ2 948 aaKnown RBP16.99■□□□□ 0.31
RPAIN-206ENST00000539417 NELFBQ8WX92 580 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 ANKRD36BP1Q96IX9 119 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 FNBP1Q96RU3 617 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 SSX2IPQ9Y2D8 614 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 CDY1Q9Y6F8 540 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 SYN3O14994 580 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 TNNC2P02585 160 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 TAF6P49848 677 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 CDR1P51861 262 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 CLDN10P78369 228 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 TDRD10Q5VZ19 366 aaKnown RBP16.99■□□□□ 0.31
RPAIN-206ENST00000539417 TTI2Q6NXR4 508 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 GPR65Q8IYL9 337 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 FAM186BQ8IYM0 893 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 DHTKD1Q96HY7 919 aaPredicted RBP16.99■□□□□ 0.31
RPAIN-206ENST00000539417 ASB2Q96Q27 587 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 TMEM209Q96SK2 561 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 RTP3Q9BQQ7 232 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 S1PR5Q9H228 398 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.99■□□□□ 0.31
RPAIN-206ENST00000539417 FBXL5Q9UKA1 691 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 ITGA11Q9UKX5 1188 aa16.99■□□□□ 0.31
RPAIN-206ENST00000539417 TCF20Q9UGU0 1960 aaKnown RBP16.98■□□□□ 0.31
RPAIN-206ENST00000539417 KPNA7A9QM74 516 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 CYB561D2O14569 222 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 VNN1O95497 513 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 C4BPAP04003 597 aaKnown RBP16.98■□□□□ 0.31
RPAIN-206ENST00000539417 ADH1AP07327 375 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 WEE2P0C1S8 567 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 OR4Q2P0C623 313 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 BMP1P13497 986 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 IL9P15248 144 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 MRPS5P82675 430 aaKnown RBP16.98■□□□□ 0.31
RPAIN-206ENST00000539417 RBP5P82980 135 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 BFSP1Q12934 665 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 ANKS3Q6ZW76 656 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 ATXN2LQ8WWM7 1075 aaKnown RBP16.98■□□□□ 0.31
RPAIN-206ENST00000539417 MAN1C1Q9NR34 630 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 CD207Q9UJ71 328 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 FRMD4BQ9Y2L6 1034 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-206ENST00000539417 BACE2Q9Y5Z0 518 aa16.98■□□□□ 0.31
RPAIN-206ENST00000539417 GOLGA6L22H0YM25 854 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 PSMA7O14818 248 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 MBTPS2O43462 519 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 HCRTO43612 131 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 LRRN2O75325 713 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 GLUD1P00367 558 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 RPL13P26373 211 aaKnown RBP16.97■□□□□ 0.31
RPAIN-206ENST00000539417 VAMP7P51809 220 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 ARPP19P56211 112 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 PPP3CAQ08209 521 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 CTXN3Q4LDR2 81 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 WSCD1Q658N2 575 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 LRRC52Q8N7C0 313 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 TRIML1Q8N9V2 468 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 TMC2Q8TDI7 906 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 CASP10Q92851 521 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 L1RE1Q9UN81 338 aa16.97■□□□□ 0.31
RPAIN-206ENST00000539417 WDR27A2RRH5 827 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 CETN3O15182 167 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 MAPK13O15264 365 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 RFPL2O75678 378 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 OAZ2O95190 189 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 VNN2O95498 520 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 PSMC2P35998 433 aaKnown RBP16.96■□□□□ 0.31
RPAIN-206ENST00000539417 MYL6P60660 151 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 ROR1Q01973 937 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 YWHAHQ04917 246 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms