RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 TPCN1Q9ULQ1 816 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 GTF3C3Q9Y5Q9 886 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 M0R2N6 131 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 SEC24BO95487 1268 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 IFNAR1P17181 557 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 IRX4P78413 519 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 KRT32Q14532 448 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 Q6ZUG5 572 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 MAEAQ7L5Y9 396 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 HAS1Q92839 578 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 HHIPQ96QV1 700 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 LRRC3Q9BY71 257 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 NUB1Q9Y5A7 615 aa13.23□□□□□ -0.29
YBX3-207ENST00000539204 PDCD11Q14690 1871 aaKnown RBP13.23□□□□□ -0.29
YBX3-207ENST00000539204 ASH1LQ9NR48 2969 aaKnown RBP13.23□□□□□ -0.29
YBX3-207ENST00000539204 FREM2Q5SZK8 3169 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 IGSF10Q6WRI0 2623 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 ADAMTS20P59510 1910 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 SMIM28A0A1B0GU29 152 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 FAM221BA6H8Z2 402 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 H0Y626 953 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 ACKR2O00590 384 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 TRDMT1O14717 391 aaKnown RBP13.22□□□□□ -0.29
YBX3-207ENST00000539204 MEFVO15553 781 aaPredicted RBP13.22□□□□□ -0.29
YBX3-207ENST00000539204 CCNT1O60563 726 aaKnown RBP13.22□□□□□ -0.29
YBX3-207ENST00000539204 RNF40O75150 1001 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 TRIM16O95361 564 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 LYPLA2O95372 231 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 BAG4O95429 457 aaKnown RBP13.22□□□□□ -0.29
YBX3-207ENST00000539204 EPHB3P54753 998 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 SIM1P81133 766 aaPredicted RBP13.22□□□□□ -0.29
YBX3-207ENST00000539204 AMPD2Q01433 879 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
YBX3-207ENST00000539204 PLD1Q13393 1074 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 MAPK6Q16659 721 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 DCAF4L1Q3SXM0 396 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 STXBP5Q5T5C0 1151 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 GALNT17Q6IS24 598 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 FSTL4Q6MZW2 842 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 RNF19BQ6ZMZ0 732 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 KRT25Q7Z3Z0 450 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 C11orf74Q86VG3 221 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 RASEFQ8IZ41 740 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 APPL2Q8NEU8 664 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 BPIFB1Q8TDL5 484 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 BRF1Q92994 677 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 C2orf40Q9H1Z8 148 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 ATXN3LQ9H3M9 355 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 POLR3BQ9NW08 1133 aaPredicted RBP13.22□□□□□ -0.29
YBX3-207ENST00000539204 EBF1Q9UH73 591 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 USP20Q9Y2K6 914 aa13.22□□□□□ -0.29
YBX3-207ENST00000539204 HELZ2Q9BYK8 2649 aaKnown RBP13.22□□□□□ -0.29
YBX3-207ENST00000539204 PATE3B3GLJ2 98 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 PODXLO00592 558 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 APBB3O95704 486 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 CAPNS1P04632 268 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 CPB1P15086 417 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 GCFC2P16383 781 aaKnown RBP13.21□□□□□ -0.29
YBX3-207ENST00000539204 MARCKSP29966 332 aaPredicted RBP13.21□□□□□ -0.29
YBX3-207ENST00000539204 ALDH1A3P47895 512 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 RARRES1P49788 294 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 DGKEP52429 567 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 LMAN2Q12907 356 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 COL28A1Q2UY09 1125 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 USP39Q53GS9 565 aaKnown RBP13.21□□□□□ -0.29
YBX3-207ENST00000539204 ARHGAP15Q53QZ3 475 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 CDCA2Q69YH5 1023 aaPredicted RBP13.21□□□□□ -0.29
YBX3-207ENST00000539204 ZNF280DQ6N043 979 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 NEK8Q86SG6 692 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 TMC8Q8IU68 726 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 SLFN12Q8IYM2 578 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 TRIM22Q8IYM9 498 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 DAGLBQ8NCG7 672 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 HSD17B14Q9BPX1 270 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 EIF2AK1Q9BQI3 630 aaKnown RBP13.21□□□□□ -0.29
YBX3-207ENST00000539204 MKNK1Q9BUB5 465 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 GPRC5CQ9NQ84 441 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 GKN1Q9NS71 199 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 SLC38A7Q9NVC3 462 aa13.21□□□□□ -0.29
YBX3-207ENST00000539204 PCNX2A6NKB5 2137 aa13.21□□□□□ -0.3
YBX3-207ENST00000539204 CCDC194A0A1B0GVG4 234 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 SPAARA0A1B0GVQ0 90 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 FGF19O95750 216 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 EGFP01133 1207 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 XRCC6P12956 609 aaKnown RBP eCLIP13.2□□□□□ -0.3
YBX3-207ENST00000539204 LIG1P18858 919 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 DRD1P21728 446 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 YARSP54577 528 aaKnown RBP13.2□□□□□ -0.3
YBX3-207ENST00000539204 CCT2P78371 535 aaKnown RBP13.2□□□□□ -0.3
YBX3-207ENST00000539204 SOX4Q06945 474 aaPredicted RBP13.2□□□□□ -0.3
YBX3-207ENST00000539204 SSRP1Q08945 709 aaKnown RBP13.2□□□□□ -0.3
YBX3-207ENST00000539204 GPR158Q5T848 1215 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 EEF1DP3Q658K8 133 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 PMS2CLQ68D20 193 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 SYT13Q7L8C5 426 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 CYP2U1Q7Z449 544 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 APBB1IPQ7Z5R6 666 aaPredicted RBP13.2□□□□□ -0.3
YBX3-207ENST00000539204 CHCHD4Q8N4Q1 142 aa13.2□□□□□ -0.3
YBX3-207ENST00000539204 PIGOQ8TEQ8 1089 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms