RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 KCNB1Q14721 858 aa9.4□□□□□ -0.91
GGA3-202ENST00000538886 KRT39Q6A163 491 aa9.4□□□□□ -0.91
GGA3-202ENST00000538886 TCF25Q9BQ70 676 aa9.4□□□□□ -0.91
GGA3-202ENST00000538886 CHST12Q9NRB3 414 aa9.4□□□□□ -0.91
GGA3-202ENST00000538886 LAMA4Q16363 1823 aa9.4□□□□□ -0.91
GGA3-202ENST00000538886 COL11A1P12107 1806 aaPredicted RBP9.39□□□□□ -0.91
GGA3-202ENST00000538886 MYH7BA7E2Y1 1941 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 AKR1B10O60218 316 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 GNA14O95837 355 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 TAF6P49848 677 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 DLG4P78352 724 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 GTF2BQ00403 316 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 HYIQ5T013 277 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 AP1ARQ63HQ0 302 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 KCNT2Q6UVM3 1135 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 B3GNT9Q6UX72 402 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 TRAPPC11Q7Z392 1133 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 PASD1Q8IV76 773 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 KCTD17Q8N5Z5 321 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 SPG21Q9NZD8 308 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 RWDD2AQ9UIY3 292 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 CD4P01730 458 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 OR4Q2P0C623 313 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 GRIK1P39086 918 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 OR5B17Q8NGF7 314 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 LRCH3Q96II8 777 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 ZNF560Q96MR9 790 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 CTAGE1Q96RT6 745 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 TMEM117Q9H0C3 514 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 TMEM134Q9H6X4 195 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 EVPLQ92817 2033 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 PPP1R12AO14974 1030 aaPredicted RBP9.39□□□□□ -0.91
GGA3-202ENST00000538886 EIF3DO15371 548 aaKnown RBP eCLIP9.39□□□□□ -0.91
GGA3-202ENST00000538886 HLA-DRAP01903 254 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 YWHAHQ04917 246 aaPredicted RBP9.39□□□□□ -0.91
GGA3-202ENST00000538886 EPC2Q52LR7 807 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 FBXL13Q8NEE6 735 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 GPR152Q8TDT2 470 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 PAAF1Q9BRP4 392 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 EPC1Q9H2F5 836 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 NDST4Q9H3R1 872 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 FZD8Q9H461 694 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 UBN1Q9NPG3 1134 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 MED4Q9NPJ6 270 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 MRPL17Q9NRX2 175 aaKnown RBP9.39□□□□□ -0.91
GGA3-202ENST00000538886 CLDND1Q9NY35 253 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 CUL9Q8IWT3 2517 aa9.39□□□□□ -0.91
GGA3-202ENST00000538886 LCHNA4D1U4 455 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 OR1D2P34982 312 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 SARSP49591 514 aaKnown RBP9.38□□□□□ -0.91
GGA3-202ENST00000538886 GOLGA8FQ08AF8 430 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 GOLGA8DPQ0D2H9 430 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 ARID5BQ14865 1188 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 PRSS55Q6UWB4 352 aaPredicted RBP9.38□□□□□ -0.91
GGA3-202ENST00000538886 ZNF354CQ86Y25 554 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 DEFB123Q8N688 67 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 KLHL23Q8NBE8 558 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 TAS1R2Q8TE23 839 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 TRPC7Q9HCX4 862 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 PLAGL2Q9UPG8 496 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 SLC27A5Q9Y2P5 690 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 ZNFX1Q9P2E3 1918 aaKnown RBP9.38□□□□□ -0.91
GGA3-202ENST00000538886 ZSWIM8A7E2V4 1837 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 SCAMP3O14828 347 aaKnown RBP9.38□□□□□ -0.91
GGA3-202ENST00000538886 KIAA0355O15063 1070 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 THAP12O43422 761 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 GJB5O95377 273 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 HOXA11P31270 313 aaPredicted RBP9.38□□□□□ -0.91
GGA3-202ENST00000538886 NAA25Q14CX7 972 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 PLEKHG4Q58EX7 1191 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 OVOS1Q6IE37 1185 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 SV2AQ7L0J3 742 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 ERVK-5Q9HDB9 667 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 SH3BP1Q9Y3L3 701 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 FHOD1Q9Y613 1164 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 F8W810 466 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 NRP1O14786 923 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 CAPN9O14815 690 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 KLRC4O43908 158 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 PFKMP08237 780 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 COL6A1P12109 1028 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 GARTP22102 1010 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 NUMBP49757 651 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 NCKAP1LP55160 1127 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 IQCEQ6IPM2 695 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 VPS36Q86VN1 386 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 ZNF507Q8TCN5 953 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 POF1BQ8WVV4 589 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 N4BP2L2Q92802 583 aaPredicted RBP9.38□□□□□ -0.91
GGA3-202ENST00000538886 CARD6Q9BX69 1037 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 GTF3C4Q9UKN8 822 aa9.38□□□□□ -0.91
GGA3-202ENST00000538886 CNTNAP2Q9UHC6 1331 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 MACROD2A1Z1Q3 448 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 STBD1O95210 358 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 ADRB2P07550 413 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 FOSL2P15408 326 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 ANXA13P27216 316 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 ERCC5P28715 1186 aaPredicted RBP9.37□□□□□ -0.91
GGA3-202ENST00000538886 GNL1P36915 607 aaPredicted RBP9.37□□□□□ -0.91
GGA3-202ENST00000538886 NOP14P78316 857 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms