RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 I3L4J1 428 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 SPTLC1O15269 473 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 PMM2O15305 246 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 STAU1O95793 577 aaKnown RBP13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 SOD2P04179 222 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 IGFBP6P24592 240 aaPredicted RBP13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 USP41Q3LFD5 358 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 WDR72Q3MJ13 1102 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 VWA3BQ502W6 1294 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 WDR44Q5JSH3 913 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 FAM171A1Q5VUB5 890 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 KIAA1841Q6NSI8 718 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 CD300LGQ6UXG3 332 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 CEP57Q86XR8 500 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 RNF214Q8ND24 703 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 GDPD5Q8WTR4 605 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 POF1BQ8WVV4 589 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 SENP8Q96LD8 212 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 HERC2P3Q9BVR0 1158 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 VN1R3Q9BXE9 311 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 LMAN2LQ9H0V9 348 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 XYLT2Q9H1B5 865 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 NDST4Q9H3R1 872 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 TLR9Q9NR96 1032 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 RAB20Q9NX57 234 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 LIMA1Q9UHB6 759 aaKnown RBP13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 COQ4Q9Y3A0 265 aa13.7□□□□□ -0.22
CDK2AP1-204ENST00000538446 EPOPA6NHQ4 379 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 M0QZQ0 153 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 SYN3O14994 580 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 GRM6O15303 877 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 HUS1O60921 280 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 EFEMP2O95967 443 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 ASS1P00966 412 aaKnown RBP13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 URODP06132 367 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 ODC1P11926 461 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 ATP1A3P13637 1013 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 P4HA1P13674 534 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 GLUD2P49448 558 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 TNNC1P63316 161 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 GRIN2CQ14957 1233 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 PTPROQ16827 1216 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 ZNF667Q5HYK9 610 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 MIIPQ5JXC2 388 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 FKBP15Q5T1M5 1219 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 SCARA3Q6AZY7 606 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 TMC7Q7Z402 723 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 RNF168Q8IYW5 571 aaPredicted RBP13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 APPL2Q8NEU8 664 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 MICAL1Q8TDZ2 1067 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 TCF25Q9BQ70 676 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 TTPALQ9BTX7 342 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 VPS16Q9H269 839 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 PRDM12Q9H4Q4 367 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 VRTNQ9H8Y1 702 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 ENTPD7Q9NQZ7 604 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 GDAP2Q9NXN4 497 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 PCDHB8Q9UN66 801 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 SNX9Q9Y5X1 595 aa13.69□□□□□ -0.22
CDK2AP1-204ENST00000538446 GTPBP10A4D1E9 387 aaKnown RBP13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 RFXAPO00287 272 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 CYB561D2O14569 222 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 LPXNO60711 386 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 CSPG5O95196 566 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 CTSAP10619 480 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 TYMPP19971 482 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 FGFR3P22607 806 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 TKTP29401 623 aaKnown RBP13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 CA8P35219 290 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 COPB1P53618 953 aaKnown RBP13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 NOP14P78316 857 aaKnown RBP13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 DSG1Q02413 1049 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 PDE12Q6L8Q7 609 aaKnown RBP13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 PDXDC1Q6P996 788 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 TAS1R1Q7RTX1 841 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 METTL23Q86XA0 190 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 RIN2Q8WYP3 895 aaPredicted RBP13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 SEMA4DQ92854 862 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 B3GALT6Q96L58 329 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 FAM161BQ96MY7 647 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 MMS19Q96T76 1030 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 PI4K2AQ9BTU6 479 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 ZBP1Q9H171 429 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 NGRNQ9NPE2 291 aaKnown RBP13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 MRPL17Q9NRX2 175 aaKnown RBP13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 CHST7Q9NS84 486 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 GCNT4Q9P109 453 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 NXF1Q9UBU9 619 aaKnown RBP13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 DSEQ9UL01 958 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 CITO14578 2027 aa13.68□□□□□ -0.22
CDK2AP1-204ENST00000538446 LRRC10BA6NIK2 292 aa13.67□□□□□ -0.22
CDK2AP1-204ENST00000538446 LGALS16A8MUM7 142 aa13.67□□□□□ -0.22
CDK2AP1-204ENST00000538446 SERPINC1P01008 464 aa13.67□□□□□ -0.22
CDK2AP1-204ENST00000538446 DNAJB1P25685 340 aa13.67□□□□□ -0.22
CDK2AP1-204ENST00000538446 FXR1P51114 621 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDK2AP1-204ENST00000538446 SMC1AQ14683 1233 aaKnown RBP13.67□□□□□ -0.22
CDK2AP1-204ENST00000538446 EXOC3L4Q17RC7 722 aa13.67□□□□□ -0.22
CDK2AP1-204ENST00000538446 FILIP1LQ4L180 1135 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms