RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 KRT72Q14CN4 511 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 HIF1AQ16665 826 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 SGSM1Q2NKQ1 1148 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 FAM151AQ8WW52 585 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 EPB41L4AQ9HCS5 686 aaPredicted RBP11.76□□□□□ -0.53
LINC00346-201ENST00000538077 DPP3Q9NY33 737 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 SELENONQ9NZV5 590 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 ZFATQ9P243 1243 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 MYMKA6NI61 221 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 PFDN1O60925 122 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 CD4P01730 458 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 LMNAP02545 664 aaKnown RBP11.76□□□□□ -0.53
LINC00346-201ENST00000538077 PDHA1P08559 390 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 FDX1P10109 184 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 SLC15A2Q16348 729 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 ENOSF1Q7L5Y1 443 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 ANKRD13AQ8IZ07 590 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 DACH2Q96NX9 599 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 KDM4CQ9H3R0 1056 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 RUBCNLQ9H714 662 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 KCNH7Q9NS40 1196 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 FBXO28Q9NVF7 368 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 ZNF521Q96K83 1311 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 MYO1GB0I1T2 1018 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 BRAFP15056 766 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 HOXA7P31268 230 aaPredicted RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 EPHX2P34913 555 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 LONRF1Q17RB8 773 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 DPF2Q92785 391 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 YME1L1Q96TA2 773 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 LIMA1Q9UHB6 759 aaKnown RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 SPATA31A6Q5VVP1 1343 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 HLA-DRAP01903 254 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 GUCY2CP25092 1073 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 CAV1Q03135 178 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 GPAT2Q6NUI2 795 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 NOTUMQ6P988 496 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 METTL16Q86W50 562 aaKnown RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 CHSY1Q86X52 802 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 BTN2A2Q8WVV5 523 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 ASPSCR1Q9BZE9 553 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 IGFLR1Q9H665 355 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 PCMTD2Q9NV79 361 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 STX18Q9P2W9 335 aaKnown RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 SCOCQ9UIL1 159 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 PCDHGB4Q9UN71 923 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 ITIH6Q6UXX5 1313 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 CCDC151A5D8V7 595 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 DNAJC8O75937 253 aaPredicted RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 ENO1P06733 434 aaKnown RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 FMO5P49326 533 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 ARFIP2P53365 341 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 CDH18Q13634 790 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 PTRHD1Q6GMV3 140 aaKnown RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 TRIM48Q8IWZ4 208 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 DCP1BQ8IZD4 617 aaKnown RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 NRBF2Q96F24 287 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 RNPC3Q96LT9 517 aaKnown RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 GPR63Q9BZJ6 419 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 PTPRMP28827 1452 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 SLC25A27O95847 323 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 RGS2P41220 211 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 RFX3P48380 749 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 COL23A1Q86Y22 540 aaPredicted RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 RCOR2Q8IZ40 523 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 HPDLQ96IR7 371 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 DNAJC7Q99615 494 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 CINPQ9BW66 212 aaPredicted RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 RAB6BQ9NRW1 208 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 SLC38A7Q9NVC3 462 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 C5orf58C9J3I9 102 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 ZNF197O14709 1029 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 MBL2P11226 248 aaPredicted RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 FMR1Q06787 632 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 USP10Q14694 798 aaKnown RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 HSP90AA5PQ58FG0 334 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 OPTNQ96CV9 577 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 TMA16Q96EY4 203 aaKnown RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 TASP1Q9H6P5 420 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 IL1RL2Q9HB29 575 aa11.75□□□□□ -0.53
LINC00346-201ENST00000538077 CHCHD3Q9NX63 227 aaKnown RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 MARCOQ9UEW3 520 aaPredicted RBP11.75□□□□□ -0.53
LINC00346-201ENST00000538077 RNF103-CHMP3A0A140T963 221 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 NCF1BA6NI72 391 aaPredicted RBP11.74□□□□□ -0.53
LINC00346-201ENST00000538077 NCF1CA8MVU1 366 aaPredicted RBP11.74□□□□□ -0.53
LINC00346-201ENST00000538077 SLC16A3O15427 465 aaKnown RBP11.74□□□□□ -0.53
LINC00346-201ENST00000538077 HAUS5O94927 633 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 MAP3K6O95382 1288 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 NCF1P14598 390 aaPredicted RBP11.74□□□□□ -0.53
LINC00346-201ENST00000538077 UBE3AQ05086 875 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 HHIPL2Q6UWX4 724 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 TBC1D19Q8N5T2 526 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 RFFLQ8WZ73 363 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 NT5C1AQ9BXI3 368 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 MAP10Q9P2G4 905 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 FHOD1Q9Y613 1164 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 V9GYQ6 96 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 C1orf167Q5SNV9 1468 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 ENTPD3O75355 529 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms