RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ZNF214Q9UL59 606 aaPredicted RBP15.2■□□□□ 0.02
USP44-203ENST00000537435 USP15Q9Y4E8 981 aaPredicted RBP15.2■□□□□ 0.02
USP44-203ENST00000537435 NUB1Q9Y5A7 615 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 SCINQ9Y6U3 715 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 K7ERI5 159 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 GH1P01241 217 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 ATP4AP20648 1035 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 GLRA2P23416 452 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 RDXP35241 583 aaKnown RBP15.19■□□□□ 0.02
USP44-203ENST00000537435 NOP14P78316 857 aaKnown RBP15.19■□□□□ 0.02
USP44-203ENST00000537435 ATP13A4Q4VNC1 1196 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 NBPF12Q5TAG4 269 aaPredicted RBP15.19■□□□□ 0.02
USP44-203ENST00000537435 HIBCHQ6NVY1 386 aaPredicted RBP15.19■□□□□ 0.02
USP44-203ENST00000537435 CCDC63Q8NA47 563 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 DEPTORQ8TB45 409 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 FEZF2Q8TBJ5 459 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 CKAP2Q8WWK9 683 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 MSTO1Q9BUK6 570 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 CYP39A1Q9NYL5 469 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 KCNG1Q9UIX4 513 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 GGT7Q9UJ14 662 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 NAALADL1Q9UQQ1 740 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 SPATA31C2B4DYI2 1134 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 PI4K2BG5E9Z4 385 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 KLRC2P26717 231 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 ELF3P78545 371 aaPredicted RBP15.19■□□□□ 0.02
USP44-203ENST00000537435 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
USP44-203ENST00000537435 TMEM132BQ14DG7 1078 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 GNPTABQ3T906 1256 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 SLFN12LQ6IEE8 588 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 OR5B17Q8NGF7 314 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 ZNF526Q8TF50 670 aaPredicted RBP15.19■□□□□ 0.02
USP44-203ENST00000537435 FAM212AQ96EL1 285 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 CGRRF1Q99675 332 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 LGALS13Q9UHV8 139 aa15.19■□□□□ 0.02
USP44-203ENST00000537435 ARID2Q68CP9 1835 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 GSTTP1A0A1W2PQM5 241 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 MGRN1O60291 552 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 CDH16O75309 829 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 PIGRP01833 764 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 TBXAS1P24557 533 aaPredicted RBP15.18■□□□□ 0.02
USP44-203ENST00000537435 SP2Q02086 613 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 NFX1Q12986 1120 aaKnown RBP15.18■□□□□ 0.02
USP44-203ENST00000537435 P3H1Q32P28 736 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 ZFYVE27Q5T4F4 411 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 KAZNQ674X7 775 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 SCARA3Q6AZY7 606 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 SEPT14Q6ZU15 432 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 CCDC91Q7Z6B0 441 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 RELL1Q8IUW5 271 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 SRRM1Q8IYB3 904 aaKnown RBP15.18■□□□□ 0.02
USP44-203ENST00000537435 PORCNQ9H237 461 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 PARVAQ9NVD7 372 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 FBXO40Q9UH90 709 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 SUN1O94901 812 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 UBOX5O94941 541 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 LDHAP00338 332 aaKnown RBP15.18■□□□□ 0.02
USP44-203ENST00000537435 EDN1P05305 212 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 KRT10P13645 584 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 TCF4P15884 667 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 NAMPTP43490 491 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 OAZ1P54368 228 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 HMGCS2P54868 508 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 RPL7AP62424 266 aaKnown RBP15.18■□□□□ 0.02
USP44-203ENST00000537435 EN1Q05925 392 aaPredicted RBP15.18■□□□□ 0.02
USP44-203ENST00000537435 ADCY1Q08828 1119 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 STAT4Q14765 748 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 SEZ6Q53EL9 994 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 CYP4F22Q6NT55 531 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 SCYL3Q8IZE3 742 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 ZNF280CQ8ND82 737 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 RBM15Q96T37 977 aaKnown RBP eCLIP15.18■□□□□ 0.02
USP44-203ENST00000537435 CCDC77Q9BR77 488 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 ZNF302Q9NR11 478 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 IP6K2Q9UHH9 426 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 AGAP1Q9UPQ3 857 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 CNTN6Q9UQ52 1028 aa15.18■□□□□ 0.02
USP44-203ENST00000537435 CNTNAP2Q9UHC6 1331 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 A0A0B4J269 797 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 OATP04181 439 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 HARSP12081 509 aaKnown RBP15.17■□□□□ 0.02
USP44-203ENST00000537435 STX2P32856 288 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 NF2P35240 595 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 CETN2P41208 172 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 MAGEA4P43358 317 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 ZNF280AP59817 542 aaPredicted RBP15.17■□□□□ 0.02
USP44-203ENST00000537435 NCOA4Q13772 614 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 ZKSCAN8Q15776 578 aaPredicted RBP15.17■□□□□ 0.02
USP44-203ENST00000537435 GLIS1Q8NBF1 620 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 ZNF606Q8WXB4 792 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 DHX33Q9H6R0 707 aaKnown RBP15.17■□□□□ 0.02
USP44-203ENST00000537435 ACAD9Q9H845 621 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 WDR81Q562E7 1941 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 KIAA1217Q5T5P2 1943 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 LIASO43766 372 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 ATF7P17544 494 aaPredicted RBP15.17■□□□□ 0.02
USP44-203ENST00000537435 ARL2P36404 184 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 ZNF772Q68DY9 489 aaPredicted RBP15.17■□□□□ 0.02
USP44-203ENST00000537435 ARHGEF18Q6ZSZ5 1173 aa15.17■□□□□ 0.02
USP44-203ENST00000537435 SAMD7Q7Z3H4 446 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms