RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SLFN11Q7Z7L1 901 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.88□□□□□ -0.194e-10■□□□□ 9.4
CDK5RAP3-202ENST00000536708 ARMC5Q96C12 935 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MFSD14AQ96MC6 490 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 HES2Q9Y543 173 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GOLGA8KD6RF30 607 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 M0QZ92 97 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ARVCFO00192 962 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MAPK13O15264 365 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 NPTXRO95502 500 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PTK7Q13308 1070 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ENOX2Q16206 610 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ZNF618Q5T7W0 954 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 LRRC31Q6UY01 552 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 VPS36Q86VN1 386 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 FMNL3Q8IVF7 1028 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 NME8Q8N427 588 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MREGQ8N565 214 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 USP38Q8NB14 1042 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ACTRT1Q8TDG2 376 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 FAM212AQ96EL1 285 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CXCL16Q9H2A7 254 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 AGO3Q9H9G7 860 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 AJAP1Q9UKB5 411 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CPSF3Q9UKF6 684 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 A0A1B0GUA9 196 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 OPA1O60313 960 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PQBP1O60828 265 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SHOX2O60902 331 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 KIF4AO95239 1232 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GHRP10912 638 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 STAT1P42224 750 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 NOP2P46087 812 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 RPS6KA1Q15418 735 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GJB7Q6PEY0 223 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 RSPH3Q86UC2 560 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 BRSK2Q8IWQ3 736 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 FAM126BQ8IXS8 530 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SLC30A5Q8TAD4 765 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GDAP1L1Q96MZ0 367 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CRISPLD2Q9H0B8 497 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TMEM117Q9H0C3 514 aa13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 NXF3Q9H4D5 531 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ALPK3Q96L96 1907 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 BHMG1C9JSJ3 638 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SGPL1O95470 568 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GLI1P08151 1106 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 H2AFZP0C0S5 128 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MAGEA9P43362 315 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MXI1P50539 228 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PTPN11Q06124 597 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PAK2Q13177 524 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MBTPS1Q14703 1052 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PSMD6Q15008 389 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 H2AFVQ71UI9 128 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 OR5B17Q8NGF7 314 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TPCN2Q8NHX9 752 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 OLIG1Q8TAK6 271 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 RIN2Q8WYP3 895 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ZNF516Q92618 1163 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TAF4BQ92750 862 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CALR3Q96L12 384 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 STK33Q9BYT3 514 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 STXBP5LQ9Y2K9 1186 aa13.86□□□□□ -0.19
CDK5RAP3-202ENST00000536708 LAMA2P24043 3122 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 DDX3XO00571 662 aaKnown RBP eCLIP13.85□□□□□ -0.191e-8■■■□□ 15.4
CDK5RAP3-202ENST00000536708 KIAA0391O15091 583 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 STAG3L1P0CL83 205 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MCF2P10911 925 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CKBP12277 381 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CD52P31358 61 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CDK7P50613 346 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TNNC1P63316 161 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CDC42EP1Q00587 391 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 NOTUMQ6P988 496 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SLC27A1Q6PCB7 646 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TRAF7Q6Q0C0 670 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 EFCAB13Q8IY85 973 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 FAM76AQ8TAV0 307 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ZBTB9Q96C00 473 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SYT11Q9BT88 431 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 RNF19AQ9NV58 838 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 UMODL1Q5DID0 1318 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 HEXIM1O94992 359 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 LDHAP00338 332 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TNNI1P19237 187 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SOX5P35711 763 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 NFX1Q12986 1120 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 LPIN1Q14693 890 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 FBXO47Q5MNV8 452 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 UBXN11Q5T124 520 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 RPAINQ86UA6 219 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CD302Q8IX05 232 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SYCE1Q8N0S2 351 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 RASGEF1CQ8N431 466 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TSEN2Q8NCE0 465 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 C1orf131Q8NDD1 294 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TMC2Q8TDI7 906 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TAS1R2Q8TE23 839 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SEMA4DQ92854 862 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms