RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 C6P13671 934 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 TACR2P21452 398 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 SLC5A3P53794 718 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 PTTG1IPP53801 180 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 APBA1Q02410 837 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 ITKQ08881 620 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 MALLQ13021 153 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 CNGB1Q14028 1251 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-207ENST00000536634 CSRP2Q16527 193 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 MFSD14BQ5SR56 506 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 SYDE2Q5VT97 1194 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 ANKS6Q68DC2 871 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 IGFL4Q6B9Z1 124 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 C1orf162Q8NEQ5 155 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-207ENST00000536634 FBXO18Q8NFZ0 1043 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 OR52N2Q8NGI0 321 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 HOXB13Q92826 284 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-207ENST00000536634 MTMR8Q96EF0 704 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 GPATCH3Q96I76 525 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 AURKAIP1Q9NWT8 199 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-207ENST00000536634 BRCA1P38398 1863 aaKnown RBP7.08□□□□□ -1.28
CLIP1-207ENST00000536634 PALLDQ8WX93 1383 aa7.08□□□□□ -1.28
CLIP1-207ENST00000536634 PKD1L3Q7Z443 1732 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 XDHP47989 1333 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 MAP2P11137 1827 aaKnown RBP7.07□□□□□ -1.28
CLIP1-207ENST00000536634 ITGB4P16144 1822 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 PHF2O75151 1096 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 CRHR1P34998 444 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 MCAMP43121 646 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 SLC25A3Q00325 362 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 PTH1RQ03431 593 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 TOB2Q14106 344 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-207ENST00000536634 CLUL1Q15846 466 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 DCAF17Q5H9S7 520 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-207ENST00000536634 PGM2L1Q6PCE3 622 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 DOK3Q7L591 496 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 FAM83AQ86UY5 434 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 AMOTL1Q8IY63 956 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 TRMT2AQ8IZ69 625 aaKnown RBP7.07□□□□□ -1.28
CLIP1-207ENST00000536634 FAM177A1Q8N128 213 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-207ENST00000536634 ZCRB1Q8TBF4 217 aaKnown RBP7.07□□□□□ -1.28
CLIP1-207ENST00000536634 IP6K1Q92551 441 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 PLEKHG4BQ96PX9 1271 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 ZNF341Q9BYN7 854 aa7.07□□□□□ -1.28
CLIP1-207ENST00000536634 ZNF703Q9H7S9 590 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-207ENST00000536634 RBM12Q9NTZ6 932 aaKnown RBP7.07□□□□□ -1.28
CLIP1-207ENST00000536634 KCPQ6ZWJ8 1503 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 GRXCR1A8MXD5 290 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 FZD9O00144 591 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 GABRDO14764 452 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 PCDHGA12O60330 932 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 GASTP01350 101 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 MYBL2P10244 700 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 SEPT2Q15019 361 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 NAIF1Q69YI7 327 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-207ENST00000536634 GPRIN1Q7Z2K8 1008 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 PDCD2LQ9BRP1 358 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 ADI1Q9BV57 179 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 CSRNP2Q9H175 543 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 PCDHGA9Q9Y5G4 932 aaKnown RBP7.06□□□□□ -1.28
CLIP1-207ENST00000536634 PCDHGA8Q9Y5G5 932 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 PCDHGA7Q9Y5G6 932 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 PCDHGA6Q9Y5G7 932 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 PCDHGA3Q9Y5H0 932 aa7.06□□□□□ -1.28
CLIP1-207ENST00000536634 GOLGA6L6A8MZA4 724 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 NPIPB8E9PQR5 432 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 HSPA1AP0DMV8 641 aaKnown RBP7.05□□□□□ -1.28
CLIP1-207ENST00000536634 HSPA1BP0DMV9 641 aaKnown RBP7.05□□□□□ -1.28
CLIP1-207ENST00000536634 GSPT1P15170 499 aaKnown RBP7.05□□□□□ -1.28
CLIP1-207ENST00000536634 ECHS1P30084 290 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 SREBF1P36956 1147 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 NOMO1Q15155 1222 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 PPM1NQ8N819 430 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 OR7D4Q8NG98 312 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 OR2I1PQ8NGU4 316 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 JADE3Q92613 823 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 FAXDC2Q96IV6 333 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 KCNH6Q9H252 994 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 BCO1Q9HAY6 547 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 MKS1Q9NXB0 559 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 DNM3Q9UQ16 869 aa7.05□□□□□ -1.28
CLIP1-207ENST00000536634 MAP3K19Q56UN5 1328 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 ARFGEF1Q9Y6D6 1849 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 EDC4Q6P2E9 1401 aaKnown RBP7.04□□□□□ -1.28
CLIP1-207ENST00000536634 C10orf71Q711Q0 1435 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 TNRC6CQ9HCJ0 1690 aaKnown RBP7.04□□□□□ -1.28
CLIP1-207ENST00000536634 A0A0G2JLW4 131 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 ANKRD62A6NC57 917 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 FAM20BO75063 409 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 HOXC9P31274 260 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 PTPN7P35236 360 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 MGAT2Q10469 447 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 FSTL1Q12841 308 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 PCBP2Q15366 365 aaKnown RBP eCLIP7.04□□□□□ -1.28
CLIP1-207ENST00000536634 PTPROQ16827 1216 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 FNDC7Q5VTL7 733 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 SLC35B2Q8TB61 432 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 DPF2Q92785 391 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 LDAHQ9H6V9 325 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 PARPBPQ9NWS1 579 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms