RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 CPNE8Q86YQ8 564 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 BAP1Q92560 729 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 SELENOOQ9BVL4 669 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 GCOM2Q9BZD3 368 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 TRMT13Q9NUP7 481 aaKnown RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 L1RE1Q9UN81 338 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 RPS6KL1Q9Y6S9 549 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 PTPRJQ12913 1337 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 F8VZ95 297 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 MAFO75444 373 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 FERP16591 822 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 ATF7P17544 494 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 ACAT1P24752 427 aaKnown RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 GNA15P30679 374 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 ZNF792Q3KQV3 632 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 ZNF667Q5HYK9 610 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 SLFN12LQ6IEE8 588 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 AADACL2Q6P093 401 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 DEFB128Q7Z7B8 93 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 CCDC25Q86WR0 208 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 CCDC170Q8IYT3 715 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 SH2D3CQ8N5H7 860 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 TRIB2Q92519 343 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 FAM149B1Q96BN6 582 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 ACAP3Q96P50 834 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 RPS6KC1Q96S38 1066 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 DNAJC7Q99615 494 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 EIF2AQ9BY44 585 aaKnown RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 DPH5Q9H2P9 285 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 VTA1Q9NP79 307 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 DNAJC17Q9NVM6 304 aaKnown RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 STK38LQ9Y2H1 464 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 COL2A1P02458 1487 aaPredicted RBP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 MYH9P35579 1960 aaKnown RBP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 CASTOR2A6NHX0 329 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 LACTBL1A8MY62 500 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 PI4K2BG5E9Z4 385 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 HCRTO43612 131 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 EXTL3O43909 919 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 PCK1P35558 622 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 ZNF131P52739 623 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 TNNC1P63316 161 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 NNTQ13423 1086 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 RBBP5Q15291 538 aaKnown RBP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 TDRD10Q5VZ19 366 aaKnown RBP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 ZNF280DQ6N043 979 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 TRAPPC11Q7Z392 1133 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 ANKS4BQ8N8V4 417 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 C18orf25Q96B23 403 aaPredicted RBP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 CYFIP2Q96F07 1278 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 PCSK1NQ9UHG2 260 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 PRG3Q9Y2Y8 225 aaPredicted RBP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 GOLGA8KD6RF30 607 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 F5H423 210 aaPredicted RBP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 RPS6KA5O75582 802 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 CTNNA2P26232 953 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 GTF2H1P32780 548 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 RFC5P40937 340 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 RNASELQ05823 741 aaKnown RBP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 JADE1Q6IE81 842 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 CCDC62Q6P9F0 684 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 MTHFD1LQ6UB35 978 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 RDM1Q8NG50 284 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 SPDL1Q96EA4 605 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 THOC1Q96FV9 657 aaKnown RBP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 TRIM7Q9C029 511 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 HAPLN2Q9GZV7 340 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 CXCL16Q9H2A7 254 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 RNF39Q9H2S5 420 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 NAGPAQ9UK23 515 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 H0YCG3 227 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 FANCGO15287 622 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 ASGR1P07306 291 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 CFHP08603 1231 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 PSEN2P49810 448 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 EFNA5P52803 228 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 SLC18A3Q16572 532 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 SPOUT1Q5T280 376 aaKnown RBP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 B3GNT9Q6UX72 402 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 KRT12Q99456 494 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 YIPF3Q9GZM5 350 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 RNF208Q9H0X6 261 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 CDT1Q9H211 546 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 KLC4Q9NSK0 619 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 IRAK4Q9NWZ3 460 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 CNOT8Q9UFF9 292 aaKnown RBP8.75□□□□□ -1.01
ABCA4-207ENST00000536513 ANAPC7Q9UJX3 599 aa8.75□□□□□ -1.01
ABCA4-207ENST00000536513 NFASCO94856 1347 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 ITIH6Q6UXX5 1313 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 C17orf102A2RUQ5 167 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 MEIS3P2A8K0S8 358 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 DDX3XO00571 662 aaKnown RBP eCLIP8.74□□□□□ -1.01
ABCA4-207ENST00000536513 OGTO15294 1046 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 PAX7P23759 505 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 CCL23P55773 120 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 PSMC1P62191 440 aaKnown RBP8.74□□□□□ -1.01
ABCA4-207ENST00000536513 FKBP1BP68106 108 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 NOGQ13253 232 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 SMAD1Q15797 465 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms