RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 ITGA11Q9UKX5 1188 aa12.22□□□□□ -0.45
TNFRSF1A-208ENST00000536194 PCDHB8Q9UN66 801 aa12.22□□□□□ -0.45
TNFRSF1A-208ENST00000536194 COG5Q9UP83 839 aa12.22□□□□□ -0.45
TNFRSF1A-208ENST00000536194 AGAP1Q9UPQ3 857 aa12.22□□□□□ -0.45
TNFRSF1A-208ENST00000536194 SSX2IPQ9Y2D8 614 aa12.22□□□□□ -0.45
TNFRSF1A-208ENST00000536194 TIMM13Q9Y5L4 95 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF1A-208ENST00000536194 PSMA7O14818 248 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 MAPK13O15264 365 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 NCK2O43639 380 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CST3P01034 146 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 ADH1AP07327 375 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 TNNI1P19237 187 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 KLRC2P26717 231 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 NDUFV1P49821 464 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 TAF6P49848 677 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 KCNQ1P51787 676 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CLUL1Q15846 466 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 DUOXA2Q1HG44 320 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 TRAPPC11Q7Z392 1133 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 FAM186BQ8IYM0 893 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 NELFBQ8WX92 580 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 DHTKD1Q96HY7 919 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 ANKRD36BP1Q96IX9 119 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 SENP8Q96LD8 212 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 MED15Q96RN5 788 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 FNBP1Q96RU3 617 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CTNND2Q9UQB3 1225 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 FRMD4BQ9Y2L6 1034 aa12.21□□□□□ -0.45
TNFRSF1A-208ENST00000536194 KPNA7A9QM74 516 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 TNNC2P02585 160 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 C4BPAP04003 597 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 KRT19P08727 400 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 RPL13P26373 211 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 PSMC2P35998 433 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 PPP1R2P41236 205 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 VAMP7P51809 220 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 FKBP3Q00688 224 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 LRRC63Q05C16 580 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 STIM1Q13586 685 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 DPCR1Q3MIW9 517 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 LEXMQ3ZCV2 418 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 TDRD10Q5VZ19 366 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 ANKRD54Q6NXT1 300 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 LILRA6Q6PI73 481 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 SYCE2Q6PIF2 218 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 DSTYKQ6XUX3 929 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 RBM43Q6ZSC3 357 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 ANKS3Q6ZW76 656 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 PALB2Q86YC2 1186 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 LRRC52Q8N7C0 313 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 ZNF560Q96MR9 790 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 MKNK1Q9BUB5 465 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 CDH22Q9UJ99 828 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 FBXL5Q9UKA1 691 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 BACE2Q9Y5Z0 518 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 CDY1Q9Y6F8 540 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 DENND4AQ7Z401 1863 aa12.2□□□□□ -0.46
TNFRSF1A-208ENST00000536194 FSD2A1L4K1 749 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 CYB561D2O14569 222 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 CETN3O15182 167 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 TGM5O43548 720 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 OAZ2O95190 189 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 VNN1O95497 513 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 CYP11A1P05108 521 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 SPATA31D3P0C874 917 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 TRIM49P0CI25 452 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 TRIM49CP0CI26 452 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 TYMPP19971 482 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 OR1D2P34982 312 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 PNPLA4P41247 253 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 STX17P56962 302 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 RBP5P82980 135 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 PPP3CAQ08209 521 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 BFSP1Q12934 665 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 PAK1Q13153 545 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 SV2CQ496J9 727 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 WSCD1Q658N2 575 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 SLC8B1Q6J4K2 584 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 PDXDC1Q6P996 788 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 FOXR2Q6PJQ5 311 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 C15orf39Q6ZRI6 1047 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 SPATA31D4Q6ZUB0 917 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 INTS8Q75QN2 995 aaKnown RBP12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 PPFIBP1Q86W92 1011 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 SMRP1Q8NCR6 262 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 APPL2Q8NEU8 664 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 ATXN2LQ8WWM7 1075 aaKnown RBP12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 CASP10Q92851 521 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 ELMO3Q96BJ8 720 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 ASB2Q96Q27 587 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 TSG101Q99816 390 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 RTP3Q9BQQ7 232 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 APOL5Q9BWW9 433 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 S1PR5Q9H228 398 aa12.19□□□□□ -0.46
TNFRSF1A-208ENST00000536194 UNC80Q8N2C7 3258 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms