RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 HFE2Q6ZVN8 426 aa17.76■□□□□ 0.43
ATL3-202ENST00000535789 ZNF507Q8TCN5 953 aa17.76■□□□□ 0.43
ATL3-202ENST00000535789 ASIC4Q96FT7 647 aa17.76■□□□□ 0.43
ATL3-202ENST00000535789 TSPAN18Q96SJ8 248 aa17.76■□□□□ 0.43
ATL3-202ENST00000535789 HCFC1R1Q9NWW0 138 aa17.76■□□□□ 0.43
ATL3-202ENST00000535789 EIF3DO15371 548 aaKnown RBP eCLIP17.75■□□□□ 0.43
ATL3-202ENST00000535789 OR4Q2P0C623 313 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 SLFN14P0C7P3 912 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 PRR29P0C7W0 189 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 CMA1P23946 247 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 HOXA9P31269 272 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 LILRA4P59901 499 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 POU5F1Q01860 360 aaKnown RBP17.75■□□□□ 0.43
ATL3-202ENST00000535789 CTXN3Q4LDR2 81 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 POTEHQ6S545 545 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 CYP26C1Q6V0L0 522 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 SYCP3Q8IZU3 236 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 BEST2Q8NFU1 509 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 BORCS6Q96GS4 357 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 PAGE5Q96GU1 130 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 LRRC27Q9C0I9 530 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 CRISPLD1Q9H336 500 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 LIMD1Q9UGP4 676 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 DPP7Q9UHL4 492 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 ATP6V1DQ9Y5K8 247 aa17.75■□□□□ 0.43
ATL3-202ENST00000535789 KIF26AQ9ULI4 1882 aaPredicted RBP17.75■□□□□ 0.43
ATL3-202ENST00000535789 XPOTO43592 962 aaKnown RBP17.74■□□□□ 0.43
ATL3-202ENST00000535789 POU2F2P09086 479 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 HNRNPA1P09651 372 aaKnown RBP eCLIP17.74■□□□□ 0.43
ATL3-202ENST00000535789 NDUFA8P51970 172 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 AMPD3Q01432 767 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 POSTNQ15063 836 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 BMT2Q1RMZ1 405 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 PPM1LQ5SGD2 360 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 LIN9Q5TKA1 542 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 ZNF280DQ6N043 979 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 ARMCX5Q6P1M9 558 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 TRIM67Q6ZTA4 783 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 GET4Q7L5D6 327 aaPredicted RBP17.74■□□□□ 0.43
ATL3-202ENST00000535789 GRASPQ7Z6J2 395 aaPredicted RBP17.74■□□□□ 0.43
ATL3-202ENST00000535789 CBWD2Q8IUF1 395 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 C1orf127Q8N9H9 656 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 KIAA0895Q8NCT3 520 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 ZNF461Q8TAF7 563 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 TMEM209Q96SK2 561 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 RTP3Q9BQQ7 232 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 TMEM206Q9H813 350 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 DPP3Q9NY33 737 aa17.74■□□□□ 0.43
ATL3-202ENST00000535789 RBAKQ9NYW8 714 aaPredicted RBP17.74■□□□□ 0.43
ATL3-202ENST00000535789 UBE4BO95155 1302 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 ANAPC1Q9H1A4 1944 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 ARHGEF37A1IGU5 675 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 EXTL3O43909 919 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 OAZ2O95190 189 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 IL18RAPO95256 599 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 ARPP19P56211 112 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 LMBRD2Q68DH5 695 aaPredicted RBP17.73■□□□□ 0.43
ATL3-202ENST00000535789 ELMSAN1Q6PJG2 1045 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 RNF19BQ6ZMZ0 732 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 NELFCDQ8IXH7 590 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 GPD1LQ8N335 351 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 ST13P5Q8NFI4 369 aaPredicted RBP17.73■□□□□ 0.43
ATL3-202ENST00000535789 OR10T2Q8NGX3 314 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 SENP8Q96LD8 212 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 GZF1Q9H116 711 aaPredicted RBP17.73■□□□□ 0.43
ATL3-202ENST00000535789 PDE11AQ9HCR9 933 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 SLC39A2Q9NP94 309 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 AGPAT3Q9NRZ7 376 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 HSPBP1Q9NZL4 362 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 DNMT3BQ9UBC3 853 aaKnown RBP17.73■□□□□ 0.43
ATL3-202ENST00000535789 SIX4Q9UIU6 781 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 SORCS3Q9UPU3 1222 aa17.73■□□□□ 0.43
ATL3-202ENST00000535789 ZNF638Q14966 1978 aaKnown RBP17.73■□□□□ 0.43
ATL3-202ENST00000535789 MIA3Q5JRA6 1907 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 TICRRQ7Z2Z1 1910 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 PVALEFA0A1B0GWK0 134 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 TMEM221A6NGB7 291 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 H7C4K7 107 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 M0R296 226 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 PDGFBP01127 241 aaPredicted RBP17.72■□□□□ 0.43
ATL3-202ENST00000535789 ATF2P15336 505 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 TYMPP19971 482 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 YWHAHQ04917 246 aaPredicted RBP17.72■□□□□ 0.43
ATL3-202ENST00000535789 SIGLEC14Q08ET2 396 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 STK4Q13043 487 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 SLC5A9Q2M3M2 681 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 OTOP3Q7RTS5 596 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 APPL2Q8NEU8 664 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 ITFG1Q8TB96 612 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 RSAD2Q8WXG1 361 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 PIDD1Q9HB75 910 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 EPS15L1Q9UBC2 864 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 INSL5Q9Y5Q6 135 aa17.72■□□□□ 0.43
ATL3-202ENST00000535789 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.72■□□□□ 0.43
ATL3-202ENST00000535789 CLIC2O15247 247 aa17.71■□□□□ 0.43
ATL3-202ENST00000535789 CYP11A1P05108 521 aa17.71■□□□□ 0.43
ATL3-202ENST00000535789 POLR2BP30876 1174 aaKnown RBP17.71■□□□□ 0.43
ATL3-202ENST00000535789 GBP2P32456 591 aaPredicted RBP17.71■□□□□ 0.43
ATL3-202ENST00000535789 UVSSAQ2YD98 709 aa17.71■□□□□ 0.43
ATL3-202ENST00000535789 KMT5BQ4FZB7 885 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms