RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 CPSF3Q9UKF6 684 aaKnown RBP11.75□□□□□ -0.53
CCDC60-202ENST00000535685 DERAQ9Y315 318 aa11.75□□□□□ -0.53
CCDC60-202ENST00000535685 NUB1Q9Y5A7 615 aa11.75□□□□□ -0.53
CCDC60-202ENST00000535685 CDY1Q9Y6F8 540 aa11.75□□□□□ -0.53
CCDC60-202ENST00000535685 FRMD3A2A2Y4 597 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 OAZ2O95190 189 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 KRT18P05783 430 aaKnown RBP11.74□□□□□ -0.53
CCDC60-202ENST00000535685 HARSP12081 509 aaKnown RBP11.74□□□□□ -0.53
CCDC60-202ENST00000535685 ATF2P15336 505 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 GAP43P17677 238 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 FSHRP23945 695 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 VCPP55072 806 aaKnown RBP11.74□□□□□ -0.53
CCDC60-202ENST00000535685 ROR1Q01973 937 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 HTR4Q13639 388 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 DHX8Q14562 1220 aaKnown RBP11.74□□□□□ -0.53
CCDC60-202ENST00000535685 ENOX2Q16206 610 aaKnown RBP11.74□□□□□ -0.53
CCDC60-202ENST00000535685 SEZ6Q53EL9 994 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 SPATA1Q5VX52 437 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 RRAGBQ5VZM2 374 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 SV2BQ7L1I2 683 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 TCEAL8Q8IYN2 117 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 SLC44A3Q8N4M1 653 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 PRSS33Q8NF86 280 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 SLC7A14Q8TBB6 771 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 SMOC2Q9H3U7 446 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 ASB7Q9H672 318 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 RPF1Q9H9Y2 349 aaKnown RBP11.74□□□□□ -0.53
CCDC60-202ENST00000535685 OLFML3Q9NRN5 406 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 FBXL5Q9UKA1 691 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 CDH7Q9ULB5 785 aa11.74□□□□□ -0.53
CCDC60-202ENST00000535685 WDR27A2RRH5 827 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 LACTBL1A8MY62 500 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 I3L4J1 428 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 MICAL2O94851 1124 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 PDGFBP01127 241 aaPredicted RBP11.73□□□□□ -0.53
CCDC60-202ENST00000535685 MYBP10242 640 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 SRFP11831 508 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 NMT1P30419 496 aaKnown RBP11.73□□□□□ -0.53
CCDC60-202ENST00000535685 MCM4P33991 863 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 TNFSF9P41273 254 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 MATR3P43243 847 aaKnown RBP eCLIP11.73□□□□□ -0.53
CCDC60-202ENST00000535685 TCF15Q12870 199 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 POSTNQ15063 836 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 PROX2Q3B8N5 592 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 SPECC1Q5M775 1068 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 ZNF280DQ6N043 979 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 FAM173BQ6P4H8 233 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 GRASPQ7Z6J2 395 aaPredicted RBP11.73□□□□□ -0.53
CCDC60-202ENST00000535685 LINC00301Q8NCQ3 95 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 BEST2Q8NFU1 509 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 CLIC6Q96NY7 704 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 MSTO1Q9BUK6 570 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 SLC2A4RGQ9NR83 387 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 TUBGCP4Q9UGJ1 667 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 AFF4Q9UHB7 1163 aaKnown RBP11.73□□□□□ -0.53
CCDC60-202ENST00000535685 C2CD2Q9Y426 696 aa11.73□□□□□ -0.53
CCDC60-202ENST00000535685 FANCMQ8IYD8 2048 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 MIA3Q5JRA6 1907 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 TSC2P49815 1807 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 MYMKA6NI61 221 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 CCL16O15467 120 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 PPP6R2O75170 966 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 CD46P15529 392 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 NPR3P17342 541 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 TYMPP19971 482 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 ALCAMQ13740 583 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 CTXN3Q4LDR2 81 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 ZBTB41Q5SVQ8 909 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 MTSS1LQ765P7 747 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 GET4Q7L5D6 327 aaPredicted RBP11.72□□□□□ -0.53
CCDC60-202ENST00000535685 SFR1Q86XK3 245 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 NT5DC4Q86YG4 428 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 HOMEZQ8IX15 550 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 GDE1Q9NZC3 331 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 DNMT3BQ9UBC3 853 aaKnown RBP11.72□□□□□ -0.53
CCDC60-202ENST00000535685 DENND4CQ5VZ89 1909 aa11.72□□□□□ -0.53
CCDC60-202ENST00000535685 ZFHX2Q9C0A1 2572 aaPredicted RBP11.72□□□□□ -0.53
CCDC60-202ENST00000535685 ANO9A1A5B4 782 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 OR6C75A6NL08 312 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 ANKRD63C9JTQ0 380 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 PIRO00625 290 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 YEATS4O95619 227 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 PTPN2P17706 415 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 AOC1P19801 751 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 ADSSP30520 456 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 ELF1P32519 619 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 MYBPC2Q14324 1141 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 PABPC1LQ4VXU2 614 aaKnown RBP11.71□□□□□ -0.53
CCDC60-202ENST00000535685 ZC2HC1CQ53FD0 456 aaPredicted RBP11.71□□□□□ -0.53
CCDC60-202ENST00000535685 L1TD1Q5T7N2 865 aaKnown RBP11.71□□□□□ -0.53
CCDC60-202ENST00000535685 CWF19L1Q69YN2 538 aaKnown RBP11.71□□□□□ -0.53
CCDC60-202ENST00000535685 PHLDB3Q6NSJ2 640 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 CNNM4Q6P4Q7 775 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 DYMQ7RTS9 669 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 TMEM105Q8N8V8 129 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 RSAD2Q8WXG1 361 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 FGF13Q92913 245 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 ZNF396Q96N95 335 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms