RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 RASSF9O75901 435 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 FGAP02671 866 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 ATP1A1P05023 1023 aaKnown RBP7.15□□□□□ -1.26
USP28-202ENST00000535607 GSTA1P08263 222 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 MYZAPP0CAP1 466 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 FUT4P22083 530 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 POLD1P28340 1107 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 PDE6BP35913 854 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 FLT3P36888 993 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 CCT6AP40227 531 aaKnown RBP7.15□□□□□ -1.26
USP28-202ENST00000535607 RPL11P62913 178 aaKnown RBP7.15□□□□□ -1.26
USP28-202ENST00000535607 MEA1Q16626 185 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 CCDC96Q2M329 555 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 LACTB2Q53H82 288 aaPredicted RBP7.15□□□□□ -1.26
USP28-202ENST00000535607 SLC35F1Q5T1Q4 408 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 GKAP1Q5VSY0 366 aaPredicted RBP7.15□□□□□ -1.26
USP28-202ENST00000535607 AP1ARQ63HQ0 302 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 RSPO2Q6UXX9 243 aaPredicted RBP7.15□□□□□ -1.26
USP28-202ENST00000535607 ZPBP2Q6X784 338 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 SMIM5Q71RC9 77 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 APTXQ7Z2E3 356 aaKnown RBP7.15□□□□□ -1.26
USP28-202ENST00000535607 CEP57Q86XR8 500 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 CPNE8Q86YQ8 564 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 CCDC13Q8IYE1 715 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 IFNL3Q8IZI9 196 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 MB21D1Q8N884 522 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 PDZD8Q8NEN9 1154 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 USP33Q8TEY7 942 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 FRS2Q8WU20 508 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 CAPZA3Q96KX2 299 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 ATP6V1G3Q96LB4 118 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 MAGEB10Q96LZ2 347 aaPredicted RBP7.15□□□□□ -1.26
USP28-202ENST00000535607 CCT8L2Q96SF2 557 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 MMP19Q99542 508 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 TMX4Q9H1E5 349 aaPredicted RBP7.15□□□□□ -1.26
USP28-202ENST00000535607 RNF41Q9H4P4 317 aaPredicted RBP7.15□□□□□ -1.26
USP28-202ENST00000535607 GREM2Q9H772 168 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 MAGEF1Q9HAY2 307 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 SLC40A1Q9NP59 571 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 ERVK13-1Q9NX77 482 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 CTNND2Q9UQB3 1225 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 GRIN2DO15399 1336 aa7.15□□□□□ -1.26
USP28-202ENST00000535607 A0A1W2PQ45 241 aaPredicted RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 A0A1W2PQY0 241 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 BLACEA4D250 179 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 E7EVH7 732 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 M0R2C6 588 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 EYA2O00167 538 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 IFIT3O14879 490 aaKnown RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 LIN7AO14910 233 aaPredicted RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 DNAJC8O75937 253 aaPredicted RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 MED26O95402 600 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 CALM1P0DP23 149 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 CALM2P0DP24 149 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 CALM3P0DP25 149 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 GNAT2P19087 354 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 TRIM21P19474 475 aaKnown RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 KRT2P35908 639 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 IGHMBP2P38935 993 aaKnown RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 AFMP43652 599 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 TRAPPC10P48553 1259 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 RTP1P59025 263 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 PDCLQ13371 301 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 CUL1Q13616 776 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 NAA25Q14CX7 972 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 SEPT2Q15019 361 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 PPP2R5AQ15172 486 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 RBBP5Q15291 538 aaKnown RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 ALX1Q15699 326 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 CLUL1Q15846 466 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 KIAA0753Q2KHM9 967 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 ODF2Q5BJF6 829 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 STYK1Q6J9G0 422 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 GALNT18Q6P9A2 607 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 CYB5D1Q6P9G0 228 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 MROH5Q6ZUA9 1318 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 KIAA0907Q7Z7F0 614 aaPredicted RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 CABP7Q86V35 215 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 NIM1KQ8IY84 436 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 SPATA4Q8NEY3 305 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 NPLOC4Q8TAT6 608 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 MYCBPAPQ8TBZ2 947 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 NELFBQ8WX92 580 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 RPGRQ92834 1020 aaKnown RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 DHTKD1Q96HY7 919 aaPredicted RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 NOX5Q96PH1 765 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 PLCD4Q9BRC7 762 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 NACAP1Q9BZK3 213 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 EDEM3Q9BZQ6 932 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 NSRP1Q9H0G5 558 aaKnown RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 STMN4Q9H169 189 aaPredicted RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 CSRNP2Q9H175 543 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 VPS16Q9H269 839 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 ADAMTS10Q9H324 1103 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 PLCB1Q9NQ66 1216 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 PAK6Q9NQU5 681 aaPredicted RBP7.14□□□□□ -1.27
USP28-202ENST00000535607 PRDM7Q9NQW5 492 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 DUOX1Q9NRD9 1551 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 GPR27Q9NS67 375 aa7.14□□□□□ -1.27
USP28-202ENST00000535607 EXOC1Q9NV70 894 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms