RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 LRRC3Q9BY71 257 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 GPR88Q9GZN0 384 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 FBRSL1Q9HCM7 1045 aaKnown RBP9.16□□□□□ -0.94
CLIP1-206ENST00000535290 WDR70Q9NW82 654 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 OTOL1A6NHN0 477 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-206ENST00000535290 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 SGSM2O43147 1006 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 ZBTB43O43298 467 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 APBB3O95704 486 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 C7P10643 843 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 GSPT1P15170 499 aaKnown RBP9.15□□□□□ -0.94
CLIP1-206ENST00000535290 GNA11P29992 359 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 YWHABP31946 246 aaKnown RBP9.15□□□□□ -0.94
CLIP1-206ENST00000535290 POU5F1BQ06416 359 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 TFDP1Q14186 410 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 MXD4Q14582 209 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-206ENST00000535290 ITPRIPL2Q3MIP1 535 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 TRIM61Q5EBN2 209 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 GLRA4Q5JXX5 417 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 NAIF1Q69YI7 327 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-206ENST00000535290 CCNI2Q6ZMN8 369 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-206ENST00000535290 HAUS6Q7Z4H7 955 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 TMC8Q8IU68 726 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 RUFY2Q8WXA3 655 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 MTRQ99707 1265 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 GOLGA2P5Q9HBQ8 144 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 SCUBE2Q9NQ36 999 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 EBF1Q9UH73 591 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 EVLQ9UI08 416 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-206ENST00000535290 MBD1Q9UIS9 605 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-206ENST00000535290 FBXL5Q9UKA1 691 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 PPME1Q9Y570 386 aa9.15□□□□□ -0.94
CLIP1-206ENST00000535290 EML5Q05BV3 1969 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 GOLGA8AA7E2F4 631 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 GOLGA8BA8MQT2 603 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 UPK3BL1B0FP48 263 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 UPK3BL2E5RIL1 263 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 DPYSL4O14531 572 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 TRDMT1O14717 391 aaKnown RBP9.14□□□□□ -0.95
CLIP1-206ENST00000535290 TRAPPC3O43617 180 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 PRAMEF12O95522 483 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 ENGP17813 658 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 GLRA2P23416 452 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 RDXP35241 583 aaKnown RBP9.14□□□□□ -0.95
CLIP1-206ENST00000535290 ADD1P35611 737 aaKnown RBP9.14□□□□□ -0.95
CLIP1-206ENST00000535290 ARL2P36404 184 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 DHPSP49366 369 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-206ENST00000535290 DGKEP52429 567 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 LMAN2Q12907 356 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 UPP1Q16831 310 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 ZNF423Q2M1K9 1284 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 XKR9Q5GH70 373 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 TPGS2Q68CL5 300 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 SYT13Q7L8C5 426 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 NOSTRINQ8IVI9 506 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 TBCKQ8TEA7 893 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 TCEANC2Q96MN5 208 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 FSCN3Q9NQT6 498 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 TMEM74BQ9NUR3 256 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 RGL1Q9NZL6 768 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 AFF4Q9UHB7 1163 aaKnown RBP9.14□□□□□ -0.95
CLIP1-206ENST00000535290 VAV3Q9UKW4 847 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 USP20Q9Y2K6 914 aa9.14□□□□□ -0.95
CLIP1-206ENST00000535290 CFAP46Q8IYW2 2715 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 CYP3A7-CYP3A51PA0A087WV96 503 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 SLC27A2O14975 620 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 IGHDP01880 384 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 P4HBP07237 508 aaKnown RBP9.13□□□□□ -0.95
CLIP1-206ENST00000535290 CYP3A7P24462 503 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 U2AF2P26368 475 aaKnown RBP eCLIP9.13□□□□□ -0.95
CLIP1-206ENST00000535290 TIE1P35590 1138 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 MRPL58Q14197 206 aaKnown RBP9.13□□□□□ -0.95
CLIP1-206ENST00000535290 DMC1Q14565 340 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 USP39Q53GS9 565 aaKnown RBP9.13□□□□□ -0.95
CLIP1-206ENST00000535290 GAREM2Q75VX8 874 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 C4orf19Q8IY42 314 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 PNPLA1Q8N8W4 532 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 DAGLBQ8NCG7 672 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 RPLP0P6Q8NHW5 317 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 BPIFB1Q8TDL5 484 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 CCDC12Q8WUD4 166 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-206ENST00000535290 EZH1Q92800 747 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-206ENST00000535290 PPP1R10Q96QC0 940 aaKnown RBP9.13□□□□□ -0.95
CLIP1-206ENST00000535290 LXNQ9BS40 222 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 NUSAP1Q9BXS6 441 aaKnown RBP9.13□□□□□ -0.95
CLIP1-206ENST00000535290 NFKBIZQ9BYH8 718 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 TPSD1Q9BZJ3 242 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 SMG9Q9H0W8 520 aaKnown RBP9.13□□□□□ -0.95
CLIP1-206ENST00000535290 DNAJC25Q9H1X3 360 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 PDZD7Q9H5P4 517 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 HPS4Q9NQG7 708 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 GKN1Q9NS71 199 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 OBP2AQ9NY56 170 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 GDAQ9Y2T3 454 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 YIPF1Q9Y548 306 aa9.13□□□□□ -0.95
CLIP1-206ENST00000535290 TENM4Q6N022 2769 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 DKC1O60832 514 aaKnown RBP eCLIP9.12□□□□□ -0.95
CLIP1-206ENST00000535290 VNN2O95498 520 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 PTGER3P43115 390 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 GALK1P51570 392 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms